RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 CTSDP07339 412 aaPredicted RBP15.42■□□□□ 0.06
SDC1-205ENST00000447124 TAS2R19P59542 299 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 STEAP1BQ6NZ63 245 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 OR13C8Q8NGS7 320 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 MARCH1Q8TCQ1 289 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 C15orf40Q8WUR7 153 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 TXN2Q99757 166 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 NUPL2O15504 423 aaKnown RBP15.41■□□□□ 0.06
SDC1-205ENST00000447124 ST8SIA3O43173 380 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 ODF3L2Q3SX64 289 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 SCGB2B2Q4G0G5 96 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 LAMTOR1Q6IAA8 161 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 FAAP20Q6NZ36 180 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 Q6ZRM9 215 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 ZFAND1Q8TCF1 268 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 PINX1Q96BK5 328 aaKnown RBP15.41■□□□□ 0.06
SDC1-205ENST00000447124 OR10C1Q96KK4 312 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 RNF2Q99496 336 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 RTBDNQ9BSG5 229 aaPredicted RBP15.41■□□□□ 0.06
SDC1-205ENST00000447124 NXF2Q9GZY0 626 aaKnown RBP15.41■□□□□ 0.06
SDC1-205ENST00000447124 COPZ2Q9P299 210 aa15.41■□□□□ 0.06
SDC1-205ENST00000447124 IGHV3-49A0A0A0MS15 119 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 IGHV7-4-1A0A0J9YVY3 117 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 INS-IGF2F8WCM5 200 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 CHEK1O14757 476 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 RGS5O15539 181 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 UCP1P25874 307 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 ETV6P41212 452 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 RELQ04864 619 aaPredicted RBP15.4■□□□□ 0.06
SDC1-205ENST00000447124 PVRIGQ6DKI7 326 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 CLVS1Q8IUQ0 354 aaPredicted RBP15.4■□□□□ 0.06
SDC1-205ENST00000447124 RHPN1-AS1Q9BWJ2 59 aa15.4■□□□□ 0.06
SDC1-205ENST00000447124 YIF1AO95070 293 aa15.39■□□□□ 0.05
SDC1-205ENST00000447124 MLANAQ16655 118 aa15.39■□□□□ 0.05
SDC1-205ENST00000447124 IGHV3OR16-13A0A075B7E8 117 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 IGHV3-74A0A0B4J1X5 117 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 IFNA17P01571 189 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 RNASE2P10153 161 aaKnown RBP15.38■□□□□ 0.05
SDC1-205ENST00000447124 AKR1C2P52895 323 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 SSBP1Q04837 148 aaKnown RBP15.38■□□□□ 0.05
SDC1-205ENST00000447124 TRIM16LQ309B1 348 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 TOMM20LQ6UXN7 152 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 CCDC71LQ8N9Z2 235 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 TMEM116Q8NCL8 245 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 DYNC2LI1Q8TCX1 351 aa15.38■□□□□ 0.05
SDC1-205ENST00000447124 MRPL36Q9P0J6 103 aaKnown RBP15.38■□□□□ 0.05
SDC1-205ENST00000447124 GNG7O60262 68 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 SNCAP37840 140 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 FAM90A2PQ658T7 463 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 LILRB2Q8N423 598 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 IL17DQ8TAD2 202 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 LHFPL5Q8TAF8 219 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 GLYATL2Q8WU03 294 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 SMIM4Q8WVI0 70 aa15.37■□□□□ 0.05
SDC1-205ENST00000447124 EPPK1P58107 5090 aaKnown RBP15.36■□□□□ 0.05
SDC1-205ENST00000447124 TRAV14DV4A0A0A6YYC5 116 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 ATG12O94817 140 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 CDS2O95674 445 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 TMEM50AO95807 157 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 APOHP02749 345 aaPredicted RBP15.36■□□□□ 0.05
SDC1-205ENST00000447124 OR5AC1P0C628 307 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 MRPS10P82664 201 aaKnown RBP15.36■□□□□ 0.05
SDC1-205ENST00000447124 SLC35G3Q8N808 338 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 DUSP18Q8NEJ0 188 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 DIRAS2Q96HU8 199 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 FNDC4Q9H6D8 234 aaPredicted RBP15.36■□□□□ 0.05
SDC1-205ENST00000447124 GPR132Q9UNW8 380 aa15.36■□□□□ 0.05
SDC1-205ENST00000447124 TEX13DA0A0J9YY54 714 aaPredicted RBP15.35■□□□□ 0.05
SDC1-205ENST00000447124 OR4C46A6NHA9 309 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 CTDSPLO15194 276 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 NPBWR1P48145 328 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 MEF2DQ14814 521 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 ZNF124Q15973 351 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 SELENOHQ8IZQ5 122 aaKnown RBP15.35■□□□□ 0.05
SDC1-205ENST00000447124 OR4C16Q8NGL9 310 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 RRNAD1Q96FB5 475 aaKnown RBP15.35■□□□□ 0.05
SDC1-205ENST00000447124 TMEM222Q9H0R3 208 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 ALMS1Q8TCU4 4167 aa15.35■□□□□ 0.05
SDC1-205ENST00000447124 DISC1C4P0D8 188 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 RPL35AP18077 110 aaKnown RBP15.34■□□□□ 0.05
SDC1-205ENST00000447124 TFPI2P48307 235 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 TMBIM6P55061 237 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 IL18Q14116 193 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 AARDQ4LEZ3 155 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 WFDC3Q8IUB2 231 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 APRG1Q8IVJ8 170 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 RAB2BQ8WUD1 216 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 GPR146Q96CH1 333 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 NAA60Q9H7X0 242 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 ZFAND3Q9H8U3 227 aa15.34■□□□□ 0.05
SDC1-205ENST00000447124 IGKV3-7A0A075B6H7 116 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 A0A1B0GU03 582 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 B3GALNT1O75752 331 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 EWSR1Q01844 656 aaKnown RBP eCLIP15.33■□□□□ 0.04
SDC1-205ENST00000447124 BSXQ3C1V8 233 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 Q6ZWC4 215 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 GBGT1Q8N5D6 347 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 SOSTQ9BQB4 213 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 PDCD10Q9BUL8 212 aa15.33■□□□□ 0.04
SDC1-205ENST00000447124 VSIRQ9H7M9 311 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms