RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 A0A1B0GUT8 65 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 Q9H3A6 140 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 RRHO14718 337 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 RPP21Q9H633 154 aaKnown RBP13.29□□□□□ -0.28
PTPN13-204ENST00000436978 AKIRIN1Q9H9L7 192 aaPredicted RBP13.29□□□□□ -0.28
PTPN13-204ENST00000436978 C9JCJ5 164 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 H3BTX0 84 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 HINT1P49773 126 aaPredicted RBP13.29□□□□□ -0.28
PTPN13-204ENST00000436978 PRELID3AQ96N28 172 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 TFF3Q07654 80 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 IL36BQ9NZH7 164 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 CDKN1AP38936 164 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 ZNF414Q96IQ9 312 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 KLK15Q9H2R5 256 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 UPK2O00526 184 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 CGAP01215 116 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 RNASE1P07998 156 aaKnown RBP13.28□□□□□ -0.28
PTPN13-204ENST00000436978 OR11H4Q8NGC9 324 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 CEP250Q9BV73 2442 aa13.28□□□□□ -0.28
PTPN13-204ENST00000436978 PROB1E7EW31 1015 aa13.27□□□□□ -0.28
PTPN13-204ENST00000436978 FAM201AQ5SY85 155 aa13.27□□□□□ -0.28
PTPN13-204ENST00000436978 REC114Q7Z4M0 266 aa13.27□□□□□ -0.28
PTPN13-204ENST00000436978 CMC4P56277 68 aaPredicted RBP13.27□□□□□ -0.28
PTPN13-204ENST00000436978 PSMG4Q5JS54 123 aa13.27□□□□□ -0.28
PTPN13-204ENST00000436978 ASCL2Q99929 193 aa13.27□□□□□ -0.28
PTPN13-204ENST00000436978 A0A1B0GTI1 187 aa13.27□□□□□ -0.28
PTPN13-204ENST00000436978 M0R381 172 aa13.27□□□□□ -0.28
PTPN13-204ENST00000436978 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.29
PTPN13-204ENST00000436978 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.27□□□□□ -0.29
PTPN13-204ENST00000436978 TCRBV4S1A1TA0A5B7 111 aa13.27□□□□□ -0.29
PTPN13-204ENST00000436978 TCF23Q7RTU1 214 aa13.27□□□□□ -0.29
PTPN13-204ENST00000436978 PLXNB3Q9ULL4 1909 aa13.27□□□□□ -0.29
PTPN13-204ENST00000436978 DUSP14O95147 198 aaKnown RBP13.27□□□□□ -0.29
PTPN13-204ENST00000436978 FBLN5Q9UBX5 448 aa13.27□□□□□ -0.29
PTPN13-204ENST00000436978 PUSL1Q8N0Z8 303 aaKnown RBP13.27□□□□□ -0.29
PTPN13-204ENST00000436978 GAGE10A6NGK3 116 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 TMEM131Q92545 1883 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 ZNF837Q96EG3 531 aaPredicted RBP13.26□□□□□ -0.29
PTPN13-204ENST00000436978 WNT2P09544 360 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 IGHV3-35A0A0C4DH35 117 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 CACNG7P62955 275 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 TRAV24A0A0B4J272 114 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 A0A1W2PRX2 142 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 ZNF257Q9Y2Q1 563 aa13.26□□□□□ -0.29
PTPN13-204ENST00000436978 CYB5R2Q6BCY4 276 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 DEPPQ9NTK1 212 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 CNOT1A5YKK6 2376 aaKnown RBP13.25□□□□□ -0.29
PTPN13-204ENST00000436978 PLSCR4Q9NRQ2 329 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 K7ERU9 68 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 DTX2Q86UW9 622 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 MDKP21741 143 aaPredicted RBP13.25□□□□□ -0.29
PTPN13-204ENST00000436978 CD5P06127 495 aa13.25□□□□□ -0.29
PTPN13-204ENST00000436978 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 IGHV3-49A0A0A0MS15 119 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 TRAV14DV4A0A0A6YYC5 116 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 DENND4AQ7Z401 1863 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 SIGLEC5O15389 551 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 SLC25A28Q96A46 364 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 AKAP6Q13023 2319 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 LY6DQ14210 128 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 PLPPR1Q8TBJ4 325 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 LYZL4Q96KX0 146 aa13.24□□□□□ -0.29
PTPN13-204ENST00000436978 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 KIAA1549LQ6ZVL6 1849 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 FHITP49789 147 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 OR10J3Q5JRS4 329 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 TMEM160Q9NX00 188 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 SPTBN1Q01082 2364 aaKnown RBP13.23□□□□□ -0.29
PTPN13-204ENST00000436978 SCO2A0A1W2PP80 73 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 PSMB11A5LHX3 300 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 TMEM170BQ5T4T1 132 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 LAIR2Q6ISS4 152 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 ORMDL3Q8N138 153 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 ZNF600Q6ZNG1 722 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 SCGB3A1Q96QR1 104 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 S4R3C0 116 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 A0A087WWC5 75 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 GGNQ86UU5 652 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 TBX6O95947 436 aaPredicted RBP13.23□□□□□ -0.29
PTPN13-204ENST00000436978 BIVMQ86UB2 503 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 OR11H1Q8NG94 326 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 OR11H2Q8NH07 326 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 RNF125Q96EQ8 232 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 EFNB1P98172 346 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 MINOS1Q5TGZ0 78 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 MINOS1-NBL1R4GNA1 71 aa13.23□□□□□ -0.29
PTPN13-204ENST00000436978 MPTX1A8MV57 137 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 RAMP3O60896 148 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 FAM166AQ6J272 317 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 TMEM183AQ8IXX5 376 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 TMEM8BA6NDV4 472 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 MALP21145 153 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms