RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PLGLB1Q02325 96 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 IGKV3D-15A0A087WSY6 115 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 IGHV3-48P01763 117 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 TMPRSS3P57727 454 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 RHOGP84095 191 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 WDR31Q8NA23 367 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 AMMECR1Q9Y4X0 333 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 TNRC6AQ8NDV7 1962 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 TMEM238C9JI98 176 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 PPIAL4DF5H284 164 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 PYYP10082 97 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 TMEM11P17152 192 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 MPV17P39210 176 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 FABP6P51161 128 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 TAS2R45P59539 299 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 PRR20EP86478 221 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 PRR20CP86479 221 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 PRR20DP86480 221 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 PRR20BP86481 221 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 PRR20AP86496 221 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 MRPL49Q13405 166 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 C12orf54Q6X4T0 127 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 LHFPL4Q7Z7J7 247 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 OR9G1Q8NH87 305 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 SARAFQ96BY9 339 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 OR2V2Q96R30 315 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 DUSP23Q9BVJ7 150 aa9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 FNDC4Q9H6D8 234 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-202ENST00000433297 LY6G6EA0A0G2JKS1 128 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 GAGE10A6NGK3 116 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 SYS1-DBNDD2H3BUS1 97 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 IL11RAQ14626 422 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 MORN5Q5VZ52 161 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 DEFB125Q8N687 156 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 AP1S3Q96PC3 154 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 CHRDL1Q9BU40 450 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 U3KQA8 63 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 PLAUP00749 431 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 ZNF134P52741 427 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 LINC00696Q6ZRV3 163 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 IGKV1OR2-108A0A075B7D4 117 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 SMPD2O60906 423 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 GNG5P63218 68 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 UTF1Q5T230 341 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 NANOS1Q8WY41 292 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 TMEM191AQ9H0A3 160 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 SVILO95425 2214 aa9.47□□□□□ -0.89
HMGCS1-202ENST00000433297 TNCP24821 2201 aa9.46□□□□□ -0.89
HMGCS1-202ENST00000433297 LYZL6O75951 148 aa9.46□□□□□ -0.89
HMGCS1-202ENST00000433297 HSPE1P61604 102 aaKnown RBP9.46□□□□□ -0.89
HMGCS1-202ENST00000433297 ACP7Q6ZNF0 438 aa9.46□□□□□ -0.89
HMGCS1-202ENST00000433297 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.89
HMGCS1-202ENST00000433297 J3QR06 171 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 SP1P08047 785 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 C8orf88P0DMB2 117 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 DMDP11532 3685 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 ADAMTS20P59510 1910 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 TET2Q6N021 2002 aaPredicted RBP9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 C7orf71A4D174 169 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 IGFBP4P22692 258 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 ZNF766Q5HY98 468 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 BLNKQ8WV28 456 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 URB1-AS1Q96HZ7 61 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 B4GALT7Q9UBV7 327 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 SLC25A10Q9UBX3 287 aaPredicted RBP9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 OR51B2Q9Y5P1 312 aa9.46□□□□□ -0.9
HMGCS1-202ENST00000433297 CACNA1EQ15878 2313 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 IGHV1-24A0A0C4DH33 117 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 ADH4P08319 380 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 CLEC2AQ6UVW9 174 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 PPP1R32Q7Z5V6 425 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 KLF14Q8TD94 323 aaPredicted RBP9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 COMMD5Q9GZQ3 224 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 IGHV3OR15-7A0A075B7D8 119 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 C15orf61A6NNL5 157 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 VWC2LB2RUY7 222 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 TIMM8AO60220 97 aaPredicted RBP9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 CFIP05156 583 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 SRFP11831 508 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 C1orf229Q6ZS94 237 aaPredicted RBP9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 SPEM1Q8N4L4 309 aa9.45□□□□□ -0.9
HMGCS1-202ENST00000433297 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 AGFG2O95081 481 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 FOXE3Q13461 319 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 ZNRF1Q8ND25 227 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 MAP1LC3CQ9BXW4 147 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 PEF1Q9UBV8 284 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 A0A1W2PRE2 83 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 TMEM251Q8N6I4 163 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 OR4S2Q8NH73 311 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 RAB37Q96AX2 223 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 SLC25A33Q9BSK2 321 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 DEFB127Q9H1M4 99 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 KLF13Q9Y2Y9 288 aaPredicted RBP9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 HEATR1Q9H583 2144 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 FAM231BA6NCW3 169 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 C21orf140B9A014 251 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms