RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 PROCRQ9UNN8 238 aa8□□□□□ -1.13
SS18-203ENST00000415083 VWC2LB2RUY7 222 aa8□□□□□ -1.13
SS18-203ENST00000415083 ERVK-16P61578 105 aa8□□□□□ -1.13
SS18-203ENST00000415083 RHOBP62745 196 aa8□□□□□ -1.13
SS18-203ENST00000415083 PRR31Q5SQ13 230 aa8□□□□□ -1.13
SS18-203ENST00000415083 PATE2Q6UY27 113 aa8□□□□□ -1.13
SS18-203ENST00000415083 ZNF788Q6ZQV5 615 aa8□□□□□ -1.13
SS18-203ENST00000415083 BAGE3Q86Y29 109 aa8□□□□□ -1.13
SS18-203ENST00000415083 BAGE2Q86Y30 109 aa8□□□□□ -1.13
SS18-203ENST00000415083 OR2T6Q8NHC8 308 aa8□□□□□ -1.13
SS18-203ENST00000415083 RND1Q92730 232 aa8□□□□□ -1.13
SS18-203ENST00000415083 TXNDC17Q9BRA2 123 aa8□□□□□ -1.13
SS18-203ENST00000415083 HRNRQ86YZ3 2850 aaPredicted RBP8□□□□□ -1.13
SS18-203ENST00000415083 IGKV1D-37A0A075B6S9 117 aa8□□□□□ -1.13
SS18-203ENST00000415083 SAA1P0DJI8 122 aaPredicted RBP8□□□□□ -1.13
SS18-203ENST00000415083 Q71RC1 249 aaPredicted RBP8□□□□□ -1.13
SS18-203ENST00000415083 LHFPL4Q7Z7J7 247 aa8□□□□□ -1.13
SS18-203ENST00000415083 SAMD10Q9BYL1 202 aa8□□□□□ -1.13
SS18-203ENST00000415083 NCOR1P1Q9H4R4 102 aa8□□□□□ -1.13
SS18-203ENST00000415083 FNDC4Q9H6D8 234 aaPredicted RBP8□□□□□ -1.13
SS18-203ENST00000415083 CHODLQ9H9P2 273 aa8□□□□□ -1.13
SS18-203ENST00000415083 LY96Q9Y6Y9 160 aa8□□□□□ -1.13
SS18-203ENST00000415083 J3QR06 171 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 CEACAM4O75871 244 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 OR5G3P0C626 314 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 BTF3P20290 206 aaKnown RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 GLRXP35754 106 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 KRTDAPP60985 99 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 RPP30P78346 268 aaKnown RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 NHLRC2Q8NBF2 726 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 FCN1O00602 326 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 IGHV3-48P01763 117 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 CRISP2P16562 243 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 KIR2DS2P43631 304 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 TCL1AP56279 114 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 Q0VG73 95 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 HINT2Q9BX68 163 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 SLC25A10Q9UBX3 287 aaPredicted RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 EP300Q09472 2414 aaPredicted RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 KLF3P57682 345 aaPredicted RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 FAM27E3Q08E93 113 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 C10orf55Q5SWW7 151 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 CORO2AQ92828 525 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 SARAFQ96BY9 339 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 MRPL20Q9BYC9 149 aaKnown RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 RPUSD1Q9UJJ7 312 aaKnown RBP7.99□□□□□ -1.13
SS18-203ENST00000415083 GOLT1BQ9Y3E0 138 aa7.99□□□□□ -1.13
SS18-203ENST00000415083 CACNA1HO95180 2353 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 A8MXE2 369 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 SNURFLB1AK76 121 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 FNDC10F2Z333 226 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 BMPR1BO00238 502 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 CX3CL1P78423 397 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 DEFB109BQ30KR1 87 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 C19orf35Q6ZS72 473 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 ZNF833PQ6ZTB9 187 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 PNKDQ8N490 385 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 DEFB124Q8NES8 71 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 SLC25A33Q9BSK2 321 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 C7orf69Q9H7B7 122 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 TRAV17A0A0B4J275 112 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 RPLP1P05386 114 aaKnown RBP7.98□□□□□ -1.13
SS18-203ENST00000415083 CCL3L1P16619 93 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 CTRLP40313 264 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 WT1-ASQ06250 92 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 C2orf83Q53S99 150 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 TIMM23BQ5SRD1 257 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 MBD6Q96DN6 1003 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 TPSG1Q9NRR2 321 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 NDUFA4L2Q9NRX3 87 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 ZNF257Q9Y2Q1 563 aa7.98□□□□□ -1.13
SS18-203ENST00000415083 SMIM27A0A1W2PRY6 76 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 HELTA6NFD8 242 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 IGLV2-23P01705 113 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 GPX1P07203 203 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 PYYP10082 97 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 RAB7AP51149 207 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 DMRTA1Q5VZB9 504 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 NIT1Q86X76 327 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 PIEZO2Q9H5I5 2752 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 TRAV34A0A0B4J273 112 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 A0A1W2PS18 150 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 TM4SF5O14894 197 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 DLEU1O43261 78 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 FTH1P19P0C7X4 201 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 RPEL1Q2QD12 228 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 TEX36Q5VZQ5 186 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 BTF3L4Q96K17 158 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 UHRF2Q96PU4 802 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 GNB1LQ9BYB4 327 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 TRAV9-1A0A075B6T8 112 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 REG1BP48304 166 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 TPPP2P59282 170 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 SLAQ13239 276 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 ATOH7Q8N100 152 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 RBM14Q96PK6 669 aaKnown RBP7.97□□□□□ -1.13
SS18-203ENST00000415083 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 RNF7Q9UBF6 113 aa7.97□□□□□ -1.13
SS18-203ENST00000415083 ROS1P08922 2347 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms