RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ZNF90Q03938 601 aa12.88□□□□□ -0.35
HOXD3-202ENST00000410016 PQLC2Q6ZP29 291 aa12.88□□□□□ -0.35
HOXD3-202ENST00000410016 CACNG8Q8WXS5 425 aa12.88□□□□□ -0.35
HOXD3-202ENST00000410016 ANKRD11Q6UB99 2663 aaPredicted RBP12.88□□□□□ -0.35
HOXD3-202ENST00000410016 KALRNO60229 2985 aa12.88□□□□□ -0.35
HOXD3-202ENST00000410016 PSMB11A5LHX3 300 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 HELTA6NFD8 242 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 REG1BP48304 166 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 RPL8P62917 257 aaKnown RBP12.87□□□□□ -0.35
HOXD3-202ENST00000410016 OR5I1Q13606 314 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 DIAPH2-AS1Q14236 149 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 REC114Q7Z4M0 266 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 WFIKKN1Q96NZ8 548 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 SLC25A33Q9BSK2 321 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 COMMD5Q9GZQ3 224 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 V9GYV3 84 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 CUL9Q8IWT3 2517 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 PPIAL4EA0A075B759 164 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 CGB1A6NKQ9 187 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 A8MWP6 167 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 PPIAL4DF5H284 164 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 APOA2P02652 100 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 PPIAL4FP0DN26 164 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 LGALS4P56470 323 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 SELENOTP62341 195 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 TCF15Q12870 199 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 FLYWCH2Q96CP2 140 aaKnown RBP12.87□□□□□ -0.35
HOXD3-202ENST00000410016 C2orf88Q9BSF0 95 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 SAP30LQ9HAJ7 183 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 JKAMPQ9P055 326 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 PPIAL4AQ9Y536 164 aa12.87□□□□□ -0.35
HOXD3-202ENST00000410016 PRRG2O14669 202 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 CBLN1P23435 193 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 CENPWQ5EE01 88 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 MRPL41Q8IXM3 137 aaKnown RBP12.86□□□□□ -0.35
HOXD3-202ENST00000410016 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
HOXD3-202ENST00000410016 OR2T6Q8NHC8 308 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 ZNF596Q8TC21 504 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 ST6GALNAC6Q969X2 333 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 TP53TG3Q9ULZ0 132 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 ZFHX2Q9C0A1 2572 aaPredicted RBP12.86□□□□□ -0.35
HOXD3-202ENST00000410016 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
HOXD3-202ENST00000410016 OR7C2O60412 319 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 MORN5Q5VZ52 161 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 TMEM167AQ8TBQ9 72 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 CCL17Q92583 94 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 FAM167A-AS1Q96KT0 104 aa12.86□□□□□ -0.35
HOXD3-202ENST00000410016 DLL1O00548 723 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 OR10J4P0C629 311 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 USF1P22415 310 aaPredicted RBP12.85□□□□□ -0.35
HOXD3-202ENST00000410016 GNG4P50150 75 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 ERVFC1-1P60608 527 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 ERHP84090 104 aaKnown RBP12.85□□□□□ -0.35
HOXD3-202ENST00000410016 WT1-ASQ06250 92 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 OR4C13Q8NGP0 309 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 ABHD17AQ96GS6 310 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 IGLV2-23P01705 113 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 C8orf88P0DMB2 117 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 TAS2R45P59539 299 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 LINC00311Q8N616 119 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
HOXD3-202ENST00000410016 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
HOXD3-202ENST00000410016 ZGRF1Q86YA3 2104 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 A0A1W2PRE2 83 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 IGLV2-8P01709 118 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 LINC00310P59036 64 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
HOXD3-202ENST00000410016 C8orf31Q8N9H6 132 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 Q8NA96 180 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 ARFGEF3Q5TH69 2177 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 GVINP1Q7Z2Y8 2422 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 DLX6P56179 175 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 SSBP2P81877 361 aaPredicted RBP12.84□□□□□ -0.35
HOXD3-202ENST00000410016 FAM71F2Q6NXP2 309 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 PDPNQ86YL7 162 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 OR10X1Q8NGY0 326 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 OR4A5Q8NH83 315 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 TMEM186Q96B77 213 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 NOL4LQ96MY1 436 aaPredicted RBP12.84□□□□□ -0.35
HOXD3-202ENST00000410016 PCNX1Q96RV3 2341 aa12.84□□□□□ -0.35
HOXD3-202ENST00000410016 TRAV5A0A0B4J249 113 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 RPEL1Q2QD12 228 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 C10orf55Q5SWW7 151 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 H1FXQ92522 213 aaKnown RBP12.83□□□□□ -0.36
HOXD3-202ENST00000410016 SLC25A2Q9BXI2 301 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 MRPL18Q9H0U6 180 aaKnown RBP12.83□□□□□ -0.36
HOXD3-202ENST00000410016 DNAJC4Q9NNZ3 241 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 ACACAQ13085 2346 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 NDUFB3O43676 98 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 LOXP28300 417 aaPredicted RBP12.83□□□□□ -0.36
HOXD3-202ENST00000410016 ZNF137PP52743 207 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 C21orf62-AS1Q17RA5 79 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 IQCJQ1A5X6 159 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms