RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 TMSB15BA0A087X1C1 80 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 TRAV14DV4A0A0A6YYC5 116 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 A8MWL6 223 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 ITGB1BP1O14713 200 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 RPS20P60866 119 aaKnown RBP12.35□□□□□ -0.43
TTC7A-204ENST00000409825 PAX8Q06710 450 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 SAPCD1Q5SSQ6 148 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 TMEM144Q7Z5S9 345 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 ANAPC16Q96DE5 110 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
TTC7A-204ENST00000409825 A0A0A6YYD4 124 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 NTF4P34130 210 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 LDLRAD2Q5SZI1 272 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 TEX36Q5VZQ5 186 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 PSMG3Q9BT73 122 aaPredicted RBP12.35□□□□□ -0.43
TTC7A-204ENST00000409825 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 ZNF586Q9NXT0 402 aa12.35□□□□□ -0.43
TTC7A-204ENST00000409825 CSPG4Q6UVK1 2322 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 BCL2P10415 239 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 SPSB3Q6PJ21 355 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 MED13Q9UHV7 2174 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 CD8AP01732 235 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 CD33P20138 364 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 OR1P1Q8NH06 330 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
TTC7A-204ENST00000409825 LMO1P25800 156 aa12.33□□□□□ -0.43
TTC7A-204ENST00000409825 NR2C2APQ86WQ0 139 aa12.33□□□□□ -0.43
TTC7A-204ENST00000409825 YTHDF2Q9Y5A9 579 aaKnown RBP12.33□□□□□ -0.43
TTC7A-204ENST00000409825 SCN8AQ9UQD0 1980 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 SPINK4O60575 86 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 SAP30O75446 220 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 AMY1AP04745 511 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 SIGLECL1Q8N7X8 197 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 ZNF524Q96C55 264 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 IFT22Q9H7X7 185 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 KAAG1Q9UBP8 84 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 IGKV3-20P01619 116 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 IFITM3Q01628 133 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 KIR3DL3Q8N743 410 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
TTC7A-204ENST00000409825 IL6RP08887 468 aaPredicted RBP12.33□□□□□ -0.44
TTC7A-204ENST00000409825 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
TTC7A-204ENST00000409825 LDLRAD4O15165 306 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 G0S2P27469 103 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 FCER1GP30273 86 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 SULT1A2P50226 295 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 CX3CL1P78423 397 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 STHQ8IWL8 128 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 PHLDA3Q9Y5J5 127 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 ZNF503-AS2A6NEH8 195 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 B4DEV8 164 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 Q71RC1 249 aaPredicted RBP12.32□□□□□ -0.44
TTC7A-204ENST00000409825 SEC11CQ9BY50 192 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 H0YJW9 148 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 FCN1O00602 326 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
TTC7A-204ENST00000409825 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 SH3BGRL3Q9H299 93 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 KLHL30-AS1Q8NEE0 82 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 FUT9Q9Y231 359 aa12.32□□□□□ -0.44
TTC7A-204ENST00000409825 Q6ZS49 121 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 RNF125Q96EQ8 232 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 IGHV3-66A0A0C4DH42 116 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 LOC102723971A0A1B0GUV8 181 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
TTC7A-204ENST00000409825 MEF2BQ02080 365 aaPredicted RBP12.31□□□□□ -0.44
TTC7A-204ENST00000409825 C15orf32Q32M92 178 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 SMUG1Q53HV7 270 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 HS3ST6Q96QI5 342 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 OBSL1O75147 1896 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 RAMP3O60896 148 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 C9orf62Q8N4C0 152 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 GFI1Q99684 422 aa12.31□□□□□ -0.44
TTC7A-204ENST00000409825 IGFBP2P18065 325 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 RUSC1-AS1Q66K80 236 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 FAM210BQ96KR6 192 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 FAM74A7A6NL05 159 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 TCL1AP56279 114 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 ZNF343Q6P1L6 599 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 ISLRO14498 428 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 RNF212Q495C1 297 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 C1orf122Q6ZSJ8 110 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 SNURFLB1AK76 121 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 ARL14EPLP0DKL9 152 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 RPL35P42766 123 aaKnown RBP12.3□□□□□ -0.44
TTC7A-204ENST00000409825 ICAM4Q14773 271 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 SIGLEC9Q9Y336 463 aa12.3□□□□□ -0.44
TTC7A-204ENST00000409825 IGHV3OR16-8A0A075B7F1 116 aa12.29□□□□□ -0.44
TTC7A-204ENST00000409825 IGKV1D-8A0A087WSZ0 117 aa12.29□□□□□ -0.44
TTC7A-204ENST00000409825 TEX50A0A1B0GTY4 177 aa12.29□□□□□ -0.44
TTC7A-204ENST00000409825 FBLL1A6NHQ2 334 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms