RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 RFNGQ9Y644 331 aa4.5□□□□□ -1.69
CLK1-202ENST00000409403 NSD1Q96L73 2696 aaPredicted RBP4.5□□□□□ -1.69
CLK1-202ENST00000409403 A0A0G2JMM0 328 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 A0A1W2PPB8 328 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 ODAMA1E959 279 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 KIR3DP1A8MWS1 328 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 NPIPA3F8WFD2 350 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 H3BMH7 237 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 H3BRM9 83 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 K7EP34 96 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 PLPP3O14495 311 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 VCYO14598 125 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 SH2D1BO14796 132 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 WNT9BO14905 357 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 ZNF207O43670 478 aaKnown RBP4.49□□□□□ -1.69
CLK1-202ENST00000409403 SYNGR2O43760 224 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 HSBP1O75506 76 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 CYC1P08574 325 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 CT62P0C5K7 136 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 CRYBB3P26998 211 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 GDF1P27539 372 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 RAB9AP51151 201 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 PAX9P55771 341 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 CKS1BP61024 79 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 SLC38A11Q08AI6 406 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 MPV17L2Q567V2 206 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 TCF23Q7RTU1 214 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 C6orf201Q7Z4U5 140 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 RTN4RL2Q86UN3 420 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 ODF3L1Q8IXM7 274 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 OR8B3Q8NGG8 313 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 OR10G9Q8NGN4 311 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 OR10G7Q8NGN6 311 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 OR1N2Q8NGR9 330 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 URB1-AS1Q96HZ7 61 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 OR8B2Q96RD0 313 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 KLHDC3Q9BQ90 382 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 TMEM70Q9BUB7 260 aa4.49□□□□□ -1.69
CLK1-202ENST00000409403 PHPT1Q9NRX4 125 aaPredicted RBP4.49□□□□□ -1.69
CLK1-202ENST00000409403 ZNF469Q96JG9 3925 aaPredicted RBP4.49□□□□□ -1.69
CLK1-202ENST00000409403 IGKV1D-8A0A087WSZ0 117 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 KIR2DS1A0A191URI9 304 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 A0A1W2PP11 408 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 C7orf71A4D174 169 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 PSMB11A5LHX3 300 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 CD300LBA8K4G0 201 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 TIMM23O14925 209 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 SAP30O75446 220 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 MPZL1O95297 269 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 TMEM50AO95807 157 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 CGAP01215 116 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 SERPINE2P07093 398 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 PPIAL4GP0DN37 164 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 AZU1P20160 251 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 KIR2DS4P43632 304 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 IER3P46695 156 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 ZNF83P51522 516 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 TGFBR3Q03167 851 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 HSD52Q0P140 79 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 RAB31Q13636 194 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 KIR2DS1Q14954 304 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 PDGFRLQ15198 375 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 WDR82Q6UXN9 313 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 Q6ZVH6 145 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 MOB1BQ7L9L4 216 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 LINC00346Q8IVM7 164 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 CA13Q8N1Q1 262 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 RPP25LQ8N5L8 163 aaKnown RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 NRACQ8N912 160 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 ZNF439Q8NDP4 499 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 OR8B12Q8NGG6 310 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 OR2AE1Q8NHA4 323 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 DOK4Q8TEW6 326 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 ZNF721Q8TF20 911 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 APOBEC3DQ96AK3 386 aaPredicted RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 DGAT2Q96PD7 388 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 SPACA5Q96QH8 159 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 TAAR6Q96RI8 345 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 CHRDL1Q9BU40 450 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 RBM24Q9BX46 236 aaKnown RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 VSIRQ9H7M9 311 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 SLC25A22Q9H936 323 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 IL36GQ9NZH8 169 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 MMP17Q9ULZ9 603 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 ARL2-SNX15V9GYD0 113 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 TLN2Q9Y4G6 2542 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 LOC102724200A0A096LPH7 203 aaPredicted RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 MUC21A0A0G2JKD1 596 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 MUC21A0A140T8X8 626 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 LOC101059948A0A1B0GTJ6 334 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 UBE2L5PA0A1B0GUS4 154 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 A0A1W2PQD3 144 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 FAM90A10PA6NDY2 464 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 OR11H12B2RN74 326 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 M0R2Z0 102 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 PDCD6O75340 191 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 DHRS3O75911 302 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 UTS2O95399 124 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms