RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LYSMD2Q8IV50 215 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 OR10W1Q8NGF6 305 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 OR1L8Q8NGR8 309 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
VCX3A-201ENST00000381089 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
VCX3A-201ENST00000381089 ZNF207O43670 478 aaKnown RBP11.78□□□□□ -0.52
VCX3A-201ENST00000381089 S1PR2O95136 353 aa11.78□□□□□ -0.52
VCX3A-201ENST00000381089 CD3DP04234 171 aa11.78□□□□□ -0.52
VCX3A-201ENST00000381089 ADMP35318 185 aa11.78□□□□□ -0.52
VCX3A-201ENST00000381089 FXYD4P59646 89 aa11.78□□□□□ -0.52
VCX3A-201ENST00000381089 APRG1Q8IVJ8 170 aa11.78□□□□□ -0.52
VCX3A-201ENST00000381089 C2CD4CQ8TF44 421 aa11.78□□□□□ -0.52
VCX3A-201ENST00000381089 HINT2Q9BX68 163 aa11.78□□□□□ -0.52
VCX3A-201ENST00000381089 F11RQ9Y624 299 aaKnown RBP11.78□□□□□ -0.52
VCX3A-201ENST00000381089 IGHV3OR16-8A0A075B7F1 116 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 NUPL2O15504 423 aaKnown RBP11.77□□□□□ -0.53
VCX3A-201ENST00000381089 TAS2R19P59542 299 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 NANOS2P60321 138 aaKnown RBP11.77□□□□□ -0.53
VCX3A-201ENST00000381089 HERV-K104P61576 105 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 PAFAH1B2P68402 229 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 WT1-ASQ06250 92 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 RNASE10Q5GAN6 216 aaKnown RBP11.77□□□□□ -0.53
VCX3A-201ENST00000381089 FAAP20Q6NZ36 180 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 TMEM229BQ8NBD8 167 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 TMEM116Q8NCL8 245 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 OR11H2Q8NH07 326 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 SCARB1Q8WTV0 552 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 TRIM63Q969Q1 353 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 HECTD4Q9Y4D8 3996 aa11.77□□□□□ -0.53
VCX3A-201ENST00000381089 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 MARCH11A6NNE9 402 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 SNAPC5O75971 98 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 RAB3DO95716 219 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 TFPI2P48307 235 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
VCX3A-201ENST00000381089 BAK1Q16611 211 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 TRIQKQ629K1 86 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 STEAP1BQ6NZ63 245 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 ZNF818PQ6ZRF7 136 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 TMEM17Q86X19 198 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 OR4D10Q8NGI6 311 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 TMEM56Q96MV1 263 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 RNF2Q99496 336 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 SDHCQ99643 169 aaPredicted RBP11.76□□□□□ -0.53
VCX3A-201ENST00000381089 ZNF2Q9BSG1 426 aaPredicted RBP11.76□□□□□ -0.53
VCX3A-201ENST00000381089 RHPN1-AS1Q9BWJ2 59 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 NDUFA4L2Q9NRX3 87 aa11.76□□□□□ -0.53
VCX3A-201ENST00000381089 LINC00854A0A1B0GVQ3 168 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 YIF1AO95070 293 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 CD5P06127 495 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 INPP1P49441 399 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 TSPAN5P62079 268 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 LINC00299Q6ZSB3 139 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 GIMAP1Q8WWP7 306 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 S100ZQ8WXG8 99 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 FKBP11Q9NYL4 201 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 OR51B2Q9Y5P1 312 aa11.75□□□□□ -0.53
VCX3A-201ENST00000381089 ANKRD20A5PA0PJZ0 165 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 CHEK1O14757 476 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 CA1P00915 261 aaPredicted RBP11.74□□□□□ -0.53
VCX3A-201ENST00000381089 AKAIN1P0CW23 69 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 TBPP20226 339 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 KLF9Q13886 244 aaPredicted RBP11.74□□□□□ -0.53
VCX3A-201ENST00000381089 ZNF846Q147U1 533 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 CENPSQ8N2Z9 138 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 OR4C16Q8NGL9 310 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 OR6F1Q8NGZ6 308 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 FXYD6Q9H0Q3 95 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 PRNDQ9UKY0 176 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 VPS13DQ5THJ4 4388 aa11.74□□□□□ -0.53
VCX3A-201ENST00000381089 IGKV3-7A0A075B6H7 116 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 TRAV14DV4A0A0A6YYC5 116 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 C11orf94C9JXX5 98 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
VCX3A-201ENST00000381089 K7EIM0 57 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 KRASP01116 189 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 CD74P04233 296 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 RLN1P04808 185 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 CTSGP08311 255 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 IL7P13232 177 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 F2RP25116 425 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 PPP5CP53041 499 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 MFAP2P55001 183 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 TMEM187Q14656 261 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 ZNF124Q15973 351 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 SCGB2B2Q4G0G5 96 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 CMTM1Q8IZ96 169 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 CADM3Q8N126 398 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 TOMM5Q8N4H5 51 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 OR10C1Q96KK4 312 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 TSC22D3Q99576 134 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
VCX3A-201ENST00000381089 WDR12Q9GZL7 423 aaKnown RBP11.73□□□□□ -0.53
VCX3A-201ENST00000381089 MCUBQ9NWR8 336 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms