RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 SFRP2Q96HF1 295 aa16.65■□□□□ 0.26
VEGFA-204ENST00000372064 AURKAIP1Q9NWT8 199 aaPredicted RBP16.65■□□□□ 0.26
VEGFA-204ENST00000372064 RELNP78509 3460 aa16.65■□□□□ 0.26
VEGFA-204ENST00000372064 NBASA2RRP1 2371 aa16.65■□□□□ 0.26
VEGFA-204ENST00000372064 CA7P43166 264 aa16.65■□□□□ 0.26
VEGFA-204ENST00000372064 ACTL10Q5JWF8 245 aa16.65■□□□□ 0.26
VEGFA-204ENST00000372064 MIOXQ9UGB7 285 aa16.65■□□□□ 0.26
VEGFA-204ENST00000372064 SIAH2O43255 324 aa16.64■□□□□ 0.25
VEGFA-204ENST00000372064 OR5G3P0C626 314 aa16.64■□□□□ 0.25
VEGFA-204ENST00000372064 CLEC12BQ2HXU8 276 aa16.64■□□□□ 0.25
VEGFA-204ENST00000372064 ACTL6BO94805 426 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 GATA2P23769 480 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-204ENST00000372064 DLX1P56177 255 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 FOXL1Q12952 345 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 C10orf55Q5SWW7 151 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 TMEM167BQ9NRX6 74 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 ABCA4P78363 2273 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 TRBV23-1A0A0A0MS06 115 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 HLA-DRB5Q30154 266 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 TGIF2LXQ8IUE1 241 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 ZNF503Q96F45 646 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 TECRQ9NZ01 308 aaKnown RBP16.63■□□□□ 0.25
VEGFA-204ENST00000372064 ANKHD1Q8IWZ3 2542 aaKnown RBP16.63■□□□□ 0.25
VEGFA-204ENST00000372064 WT1-ASQ06250 92 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 PDZD11Q5EBL8 140 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 COA6Q5JTJ3 125 aaKnown RBP16.63■□□□□ 0.25
VEGFA-204ENST00000372064 OR10D4PQ8NGN7 298 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 OCC1Q8TAD7 63 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 TMEM133Q9H2Q1 129 aa16.63■□□□□ 0.25
VEGFA-204ENST00000372064 C9JCJ5 164 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 CCL21O00585 134 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 MC5RP33032 325 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 TMEM183AQ8IXX5 376 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 MUC15Q8N387 334 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 UHRF2Q96PU4 802 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 ZNF430Q9H8G1 570 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-204ENST00000372064 LY96Q9Y6Y9 160 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 MALRD1Q5VYJ5 2156 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 PRB3Q04118 309 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-204ENST00000372064 FBXL19-AS1Q494R0 122 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 RNASEH2CQ8TDP1 164 aaKnown RBP16.62■□□□□ 0.25
VEGFA-204ENST00000372064 BTF3L4Q96K17 158 aa16.62■□□□□ 0.25
VEGFA-204ENST00000372064 MDFIC2A0A1B0GVS7 189 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 IL3RAP26951 378 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 PSG5Q15238 335 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 PQLC2Q6ZP29 291 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 RITA1Q96K30 269 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 PSMB11A5LHX3 300 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 CDSNQ15517 529 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 MRGPRG-AS1Q2M3A8 158 aa16.61■□□□□ 0.25
VEGFA-204ENST00000372064 IGHV3-72A0A0B4J1Y9 119 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 FSTL3O95633 263 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 TEX38Q6PEX7 206 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 OR2T6Q8NHC8 308 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 TNFRSF14Q92956 283 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 ATRXP46100 2492 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 ACY3Q96HD9 319 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 TPSG1Q9NRR2 321 aa16.6■□□□□ 0.25
VEGFA-204ENST00000372064 LINC00587B1AMM8 73 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 SLC25A17O43808 307 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 IGHV2-70P01814 119 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 TAS2R45P59539 299 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 VMA21Q3ZAQ7 101 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 TMEM37Q8WXS4 190 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 HIST1H2BLQ99880 126 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 RALYQ9UKM9 306 aaKnown RBP16.59■□□□□ 0.25
VEGFA-204ENST00000372064 K7EN84 100 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 FABP4P15090 132 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 LGALS7P47929 136 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 PDLIM4P50479 330 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 MRPL32Q9BYC8 188 aaKnown RBP16.59■□□□□ 0.25
VEGFA-204ENST00000372064 PLXNB1O43157 2135 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 NAV3Q8IVL0 2385 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 PPOXP50336 477 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 UCNP55089 124 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 RPL15P61313 204 aaKnown RBP16.59■□□□□ 0.25
VEGFA-204ENST00000372064 ZNF841Q6ZN19 808 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 OR1P1Q8NH06 330 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 SLC25A33Q9BSK2 321 aa16.59■□□□□ 0.25
VEGFA-204ENST00000372064 FNDC4Q9H6D8 234 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-204ENST00000372064 NHLH1Q02575 133 aa16.58■□□□□ 0.24
VEGFA-204ENST00000372064 SGMS2Q8NHU3 365 aa16.58■□□□□ 0.24
VEGFA-204ENST00000372064 ENSAO43768 121 aaKnown RBP16.58■□□□□ 0.24
VEGFA-204ENST00000372064 SUB1P53999 127 aaKnown RBP eCLIP16.58■□□□□ 0.24
VEGFA-204ENST00000372064 OR10G8Q8NGN5 311 aa16.58■□□□□ 0.24
VEGFA-204ENST00000372064 C8orf88P0DMB2 117 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 KLRB1Q12918 225 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 DNLZQ5SXM8 178 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 EAF1Q96JC9 268 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-204ENST00000372064 RNF2Q99496 336 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 XKRY2A2RUG3 117 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 IGLV1-47P01700 117 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 ST6GALNAC3Q8NDV1 305 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 PACRGQ96M98 296 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-204ENST00000372064 DMRT1Q9Y5R6 373 aa16.57■□□□□ 0.24
VEGFA-204ENST00000372064 IGHV2-26A0A0B4J1V2 119 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 A0A1W2PPI3 338 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 OR7C2O60412 319 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 SSBP2P81877 361 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-204ENST00000372064 ADORA2A-AS1P86434 159 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms