RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TRAV40A0A0B4J280 105 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 EFNB1P98172 346 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 F5P12259 2224 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 IGKV3D-20A0A0C4DH25 116 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 GATA2P23769 480 aaPredicted RBP19.28■□□□□ 0.68
NPAS3-201ENST00000346562 SRSF1Q07955 248 aaKnown RBP eCLIP19.28■□□□□ 0.68
NPAS3-201ENST00000346562 CNTRLQ7Z7A1 2325 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 SPAG17Q6Q759 2223 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 NAT1P18440 290 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 LY6DQ14210 128 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 OR9G4Q8NGQ1 327 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 WBP1Q96G27 269 aa19.28■□□□□ 0.68
NPAS3-201ENST00000346562 PAX8Q06710 450 aa19.27■□□□□ 0.68
NPAS3-201ENST00000346562 ZP1P60852 638 aa19.27■□□□□ 0.68
NPAS3-201ENST00000346562 C18orf12Q96KH6 178 aa19.27■□□□□ 0.68
NPAS3-201ENST00000346562 ZNF837Q96EG3 531 aaPredicted RBP19.27■□□□□ 0.67
NPAS3-201ENST00000346562 FAM90A9PA6NNJ1 464 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 HIGD1CA8MV81 97 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 ZNF585BQ52M93 769 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 SIGLEC15Q6ZMC9 328 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 SRP19P09132 144 aaKnown RBP19.26■□□□□ 0.67
NPAS3-201ENST00000346562 GNG5P63218 68 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 RNF182Q8N6D2 247 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 ARFGEF1Q9Y6D6 1849 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 LTBRP36941 435 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 IMMP2LQ96T52 175 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 SPRR3Q9UBC9 169 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 TRAV41A0A0B4J266 112 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 ZNF415Q09FC8 603 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 C3orf36Q3SXR2 165 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 SLC25A28Q96A46 364 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 TRIP12Q14669 1992 aaPredicted RBP19.26■□□□□ 0.67
NPAS3-201ENST00000346562 A0A1B0GWB2 263 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 SAP30O75446 220 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 PRADC1Q9BSG0 188 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 ZNF257Q9Y2Q1 563 aa19.26■□□□□ 0.67
NPAS3-201ENST00000346562 APOMO95445 188 aa19.25■□□□□ 0.67
NPAS3-201ENST00000346562 ZXDCQ2QGD7 858 aaPredicted RBP19.25■□□□□ 0.67
NPAS3-201ENST00000346562 ADARB2-AS1A8MUL3 147 aa19.25■□□□□ 0.67
NPAS3-201ENST00000346562 TIMM23O14925 209 aa19.25■□□□□ 0.67
NPAS3-201ENST00000346562 CD28P10747 220 aa19.25■□□□□ 0.67
NPAS3-201ENST00000346562 IGFBP3P17936 291 aaPredicted RBP19.25■□□□□ 0.67
NPAS3-201ENST00000346562 C11orf68Q9H3H3 251 aaKnown RBP19.25■□□□□ 0.67
NPAS3-201ENST00000346562 CYSLTR1Q9Y271 337 aa19.25■□□□□ 0.67
NPAS3-201ENST00000346562 FBLN7Q53RD9 439 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 OR5A1Q8NGJ0 315 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 RBBP6Q7Z6E9 1792 aaKnown RBP19.24■□□□□ 0.67
NPAS3-201ENST00000346562 IGLV3-32A0A0A0MS00 114 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 PRB3Q04118 309 aaPredicted RBP19.24■□□□□ 0.67
NPAS3-201ENST00000346562 CYB5R2Q6BCY4 276 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 C20orf204Q6ZNR8 217 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 SSC4DQ8WTU2 575 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 EPDR1Q9UM22 224 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 A0A1B0GTI1 187 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 CTAG1AP78358 180 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 PCM1Q15154 2024 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 Q5BKY6 102 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 PRCDQ00LT1 54 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 ORMDL2Q53FV1 153 aa19.24■□□□□ 0.67
NPAS3-201ENST00000346562 CHCHD5Q9BSY4 110 aa19.23■□□□□ 0.67
NPAS3-201ENST00000346562 EFNA4P52798 201 aa19.23■□□□□ 0.67
NPAS3-201ENST00000346562 A0A087WWC5 75 aa19.23■□□□□ 0.67
NPAS3-201ENST00000346562 FAM169BQ8N8A8 192 aa19.23■□□□□ 0.67
NPAS3-201ENST00000346562 IL18BPO95998 194 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 LILRA1O75019 489 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 CD24P25063 80 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 DTX1Q86Y01 620 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 SEPSECSQ9HD40 501 aaKnown RBP19.22■□□□□ 0.67
NPAS3-201ENST00000346562 LYNX1G3V0Z9 82 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 IGHV1-46P01743 117 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 LYNX1P0DP58 116 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 ZFP36L1Q07352 338 aaKnown RBP19.22■□□□□ 0.67
NPAS3-201ENST00000346562 VMO1Q7Z5L0 202 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 TMEM190Q8WZ59 177 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 SLC25A15Q9Y619 301 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 CD5P06127 495 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 CCL20P78556 96 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 PSG8Q9UQ74 426 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 CARHSP1Q9Y2V2 147 aaKnown RBP19.22■□□□□ 0.67
NPAS3-201ENST00000346562 ANKRD31Q8N7Z5 1873 aa19.22■□□□□ 0.67
NPAS3-201ENST00000346562 ERVH48-1M5A8F1 160 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 CSRP3P50461 194 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 PAX2Q02962 417 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 SNAI2O43623 268 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 FAM166AQ6J272 317 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 TIMP3P35625 211 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 TMEM86BQ8N661 226 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 GTF3AQ92664 365 aaKnown RBP19.21■□□□□ 0.67
NPAS3-201ENST00000346562 VWCEQ96DN2 955 aa19.21■□□□□ 0.67
NPAS3-201ENST00000346562 ERVK11-1P61568 191 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 TMEM95Q3KNT9 176 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 OR2K2Q8NGT1 345 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 DEPPQ9NTK1 212 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 PPBPP02775 128 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 C14orf144Q96I85 54 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 CCL1P22362 96 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 C11orf44Q8N8P7 122 aa19.2■□□□□ 0.66
NPAS3-201ENST00000346562 CHTOPQ9Y3Y2 248 aaKnown RBP19.19■□□□□ 0.66
NPAS3-201ENST00000346562 LYZL4Q96KX0 146 aa19.19■□□□□ 0.66
NPAS3-201ENST00000346562 ATG2BQ96BY7 2078 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms