RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C18orf12Q96KH6 178 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 YPEL2Q96QA6 119 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 NDUFAF3Q9BU61 184 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 ZNF506Q5JVG8 444 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 RBM14Q96PK6 669 aaKnown RBP12.93□□□□□ -0.34
PDGFB-201ENST00000331163 PITX3O75364 302 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 GALR1P47211 349 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 THBS3P49746 956 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 LOXL3P58215 753 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 TNFRSF9Q07011 255 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 JOSD1Q15040 202 aaPredicted RBP12.92□□□□□ -0.34
PDGFB-201ENST00000331163 OR4A47Q6IF82 309 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 ZNF596Q8TC21 504 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 CSMD1Q96PZ7 3565 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 HPRT1P00492 218 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 OPRK1P41145 380 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 NUTF2P61970 127 aaKnown RBP12.92□□□□□ -0.34
PDGFB-201ENST00000331163 VMA21Q3ZAQ7 101 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 TEX36Q5VZQ5 186 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 TMEM183AQ8IXX5 376 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 SLC25A22Q9H936 323 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 OR51B2Q9Y5P1 312 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 SOX21Q9Y651 276 aaPredicted RBP12.92□□□□□ -0.34
PDGFB-201ENST00000331163 A0A087WWC5 75 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 HTD2P86397 168 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 C1orf229Q6ZS94 237 aaPredicted RBP12.92□□□□□ -0.34
PDGFB-201ENST00000331163 KIR3DL3Q8N743 410 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 C2orf88Q9BSF0 95 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 SNHG12Q9BXW3 62 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 SLC39A9Q9NUM3 307 aa12.92□□□□□ -0.34
PDGFB-201ENST00000331163 IGHV3-23P01764 117 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 BCL2P10415 239 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 LOC102723971A0A1B0GUV8 181 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 SAA1P0DJI8 122 aaPredicted RBP12.91□□□□□ -0.34
PDGFB-201ENST00000331163 MEF2CQ06413 473 aaPredicted RBP12.91□□□□□ -0.34
PDGFB-201ENST00000331163 TCF23Q7RTU1 214 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 OR4D5Q8NGN0 318 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 OR4F5Q8NH21 305 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 MS4A10Q96PG2 267 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 OR4F4Q96R69 305 aa12.91□□□□□ -0.34
PDGFB-201ENST00000331163 LYRM2Q9NU23 88 aaPredicted RBP12.91□□□□□ -0.34
PDGFB-201ENST00000331163 HBG1P69891 147 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 HBG2P69892 147 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 SLC38A11Q08AI6 406 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.34
PDGFB-201ENST00000331163 Q5PR19 223 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 FAM90A2PQ658T7 463 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 Q96MF0 132 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 TPSG1Q9NRR2 321 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 A0A1B0GU03 582 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 DPM3Q9P2X0 92 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 SRP14P37108 136 aaKnown RBP12.9□□□□□ -0.34
PDGFB-201ENST00000331163 CEACAM3P40198 252 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 AGMATQ9BSE5 352 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 GNB4Q9HAV0 340 aa12.9□□□□□ -0.34
PDGFB-201ENST00000331163 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 PCP4P48539 62 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 MLANAQ16655 118 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 GATAD1Q8WUU5 269 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM18Q96B42 140 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 ATP5SQ99766 215 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 PROP1O75360 226 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 FOXH1O75593 365 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 TAS2R30P59541 319 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 BSXQ3C1V8 233 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 TEX38Q6PEX7 206 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 SSX7Q7RTT5 188 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 RITA1Q96K30 269 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 WASHC3Q9Y3C0 194 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 M0R143 59 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 TCF19Q9Y242 345 aa12.89□□□□□ -0.35
PDGFB-201ENST00000331163 HCFC1P51610 2035 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 UBE2G2P60604 165 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 SDF2L1Q9HCN8 221 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 ATRQ13535 2644 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
PDGFB-201ENST00000331163 MAS1LP35410 378 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 ERHP84090 104 aaKnown RBP12.88□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM241Q24JQ0 296 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 TOMM20LQ6UXN7 152 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
PDGFB-201ENST00000331163 RAI1Q7Z5J4 1906 aaPredicted RBP12.88□□□□□ -0.35
PDGFB-201ENST00000331163 SRRM4A7MD48 611 aaKnown RBP12.87□□□□□ -0.35
PDGFB-201ENST00000331163 RPL8P62917 257 aaKnown RBP12.87□□□□□ -0.35
PDGFB-201ENST00000331163 OR4C13Q8NGP0 309 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
PDGFB-201ENST00000331163 SMDT1Q9H4I9 107 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 RPH3ALQ9UNE2 315 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 TRBV6-6A0A0A6YYG2 114 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 ZNF320A2RRD8 509 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 GRIFINA4D1Z8 144 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms