RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 UHRF2Q96PU4 802 aa11.77□□□□□ -0.52
TPM3-206ENST00000330188 FABP4P15090 132 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 HNF1AP20823 631 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 TMEM183AQ8IXX5 376 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 OR2T6Q8NHC8 308 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 LINC01560Q8TB33 94 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 C19orf24Q9BVV8 132 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 TMEM133Q9H2Q1 129 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 CHODLQ9H9P2 273 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 TMEM167BQ9NRX6 74 aa11.77□□□□□ -0.53
TPM3-206ENST00000330188 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
TPM3-206ENST00000330188 PTPRZ1P23471 2315 aaPredicted RBP11.76□□□□□ -0.53
TPM3-206ENST00000330188 FOXL1Q12952 345 aa11.76□□□□□ -0.53
TPM3-206ENST00000330188 MRGPRG-AS1Q2M3A8 158 aa11.76□□□□□ -0.53
TPM3-206ENST00000330188 HLA-DRB5Q30154 266 aa11.76□□□□□ -0.53
TPM3-206ENST00000330188 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
TPM3-206ENST00000330188 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
TPM3-206ENST00000330188 TRBV23-1A0A0A0MS06 115 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 C9JCJ5 164 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 SLC25A17O43808 307 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 COA6Q5JTJ3 125 aaKnown RBP11.75□□□□□ -0.53
TPM3-206ENST00000330188 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 PQLC2Q6ZP29 291 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 OR1P1Q8NH06 330 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 TMEM37Q8WXS4 190 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 ACY3Q96HD9 319 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 RITA1Q96K30 269 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 HIST1H2BLQ99880 126 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 FNDC4Q9H6D8 234 aaPredicted RBP11.75□□□□□ -0.53
TPM3-206ENST00000330188 POLEQ07864 2286 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 PSMB11A5LHX3 300 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 FAM90A27PA6NNH2 459 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 LYNX1G3V0Z9 82 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 K7EN84 100 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 IGHV2-70P01814 119 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 LYNX1P0DP58 116 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 GRNP28799 593 aaKnown RBP11.75□□□□□ -0.53
TPM3-206ENST00000330188 MC5RP33032 325 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 SSBP2P81877 361 aaPredicted RBP11.75□□□□□ -0.53
TPM3-206ENST00000330188 VMA21Q3ZAQ7 101 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 RNASEH2CQ8TDP1 164 aaKnown RBP11.75□□□□□ -0.53
TPM3-206ENST00000330188 MSRB2Q9Y3D2 182 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 LY96Q9Y6Y9 160 aa11.75□□□□□ -0.53
TPM3-206ENST00000330188 SIAH2O43255 324 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 OR7C2O60412 319 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 CA7P43166 264 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 PPOXP50336 477 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 TAS2R45P59539 299 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 RPL15P61313 204 aaKnown RBP11.74□□□□□ -0.53
TPM3-206ENST00000330188 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 BTF3L4Q96K17 158 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 SLC25A33Q9BSK2 321 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 RALYQ9UKM9 306 aaKnown RBP11.74□□□□□ -0.53
TPM3-206ENST00000330188 PTPRQQ9UMZ3 2332 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 IGHV3-72A0A0B4J1Y9 119 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 A0A0U1RQK1 487 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 ZNF320A2RRD8 509 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 XKRY2A2RUG3 117 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 KALRNO60229 2985 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 C8orf88P0DMB2 117 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 DLX1P56177 255 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 FBXL19-AS1Q494R0 122 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 ZNF841Q6ZN19 808 aa11.74□□□□□ -0.53
TPM3-206ENST00000330188 EAF1Q96JC9 268 aaPredicted RBP11.74□□□□□ -0.53
TPM3-206ENST00000330188 PACRGQ96M98 296 aaPredicted RBP11.74□□□□□ -0.53
TPM3-206ENST00000330188 IGHV2-26A0A0B4J1V2 119 aa11.73□□□□□ -0.53
TPM3-206ENST00000330188 A0A1W2PPI3 338 aa11.73□□□□□ -0.53
TPM3-206ENST00000330188 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
TPM3-206ENST00000330188 LGALS7P47929 136 aa11.73□□□□□ -0.53
TPM3-206ENST00000330188 SUB1P53999 127 aaKnown RBP eCLIP11.73□□□□□ -0.534e-7■□□□□ 9
TPM3-206ENST00000330188 CASP6P55212 293 aa11.73□□□□□ -0.53
TPM3-206ENST00000330188 PRSS8Q16651 343 aa11.73□□□□□ -0.53
TPM3-206ENST00000330188 MUC15Q8N387 334 aa11.73□□□□□ -0.53
TPM3-206ENST00000330188 TNFRSF14Q92956 283 aa11.73□□□□□ -0.53
TPM3-206ENST00000330188 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
TPM3-206ENST00000330188 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 CRYBB3P26998 211 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 PDLIM4P50479 330 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 MORN5Q5VZ52 161 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 FAM167A-AS1Q96KT0 104 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 SLC25A2Q9BXI2 301 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 DMRT1Q9Y5R6 373 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 IGKV1D-37A0A075B6S9 117 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 GGTLC3B5MD39 225 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 AMBPP02760 352 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 OR10J4P0C629 311 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 NPIPB3Q92617 1050 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 RNF2Q99496 336 aa11.72□□□□□ -0.53
TPM3-206ENST00000330188 MRPL36Q9P0J6 103 aaKnown RBP11.72□□□□□ -0.53
TPM3-206ENST00000330188 TRAV5A0A0B4J249 113 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 IGHV3-48P01763 117 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 REG1AP05451 166 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 PRB3Q04118 309 aaPredicted RBP11.71□□□□□ -0.53
TPM3-206ENST00000330188 TEX45Q8NA69 505 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 THAP8Q8NA92 274 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 IL36BQ9NZH7 164 aa11.71□□□□□ -0.53
TPM3-206ENST00000330188 TRAPPC1Q9Y5R8 145 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms