RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 FGF12P61328 243 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 LILRA6Q6PI73 481 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 WFDC1Q9HC57 220 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 G6PC2Q9NQR9 355 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 TRAV5A0A0B4J249 113 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 IGFBP2P18065 325 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 CYP2G1PQ6ZSU1 146 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 OR10W1Q8NGF6 305 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 PKD1L2Q7Z442 2459 aa6.71□□□□□ -1.34
CIITA-201ENST00000324288 NPIPB4C9JG80 1138 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 ATP5LO75964 103 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 LHFPL6Q9Y693 200 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 TSPOP30536 169 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 SAMD5Q5TGI4 173 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 LCNL1Q6ZST4 164 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
CIITA-201ENST00000324288 LINC01587Q99440 93 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 RNF115Q9Y4L5 304 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 C1QTNF9P0C862 333 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 FOXS1O43638 330 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 ZNF818PQ6ZRF7 136 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 WFDC12Q8WWY7 111 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 NGFRP08138 427 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 EEF1AKMT3Q96AZ1 226 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 TNFRSF18Q9Y5U5 241 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 IGHV1-45A0A0A0MS14 117 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 CTSBP07858 339 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 TDGF1P13385 188 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 NPIPB11E5RHQ5 1161 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 CD55P08174 381 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 TBR1Q16650 682 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 FOXA2Q9Y261 457 aaPredicted RBP6.7□□□□□ -1.34
CIITA-201ENST00000324288 CD1AP06126 327 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 CNTFRP26992 372 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 GTSCR1Q86UQ5 136 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 MARS2Q96GW9 593 aaKnown RBP6.7□□□□□ -1.34
CIITA-201ENST00000324288 A0A1B0GUT8 65 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 IGHV3-11P01762 117 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 HOXB1P14653 301 aaPredicted RBP6.7□□□□□ -1.34
CIITA-201ENST00000324288 PPIFP30405 207 aaKnown RBP6.7□□□□□ -1.34
CIITA-201ENST00000324288 STPG1Q5TH74 334 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 LAIR2Q6ISS4 152 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 PRDM13Q9H4Q3 707 aa6.7□□□□□ -1.34
CIITA-201ENST00000324288 CEACAM1P13688 526 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 FAM159AQ6UWV7 190 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 HOXA3O43365 443 aaPredicted RBP6.69□□□□□ -1.34
CIITA-201ENST00000324288 HIST1H4AP62805 103 aaKnown RBP6.69□□□□□ -1.34
CIITA-201ENST00000324288 HSPE1P61604 102 aaKnown RBP6.69□□□□□ -1.34
CIITA-201ENST00000324288 SRD5A1P18405 259 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 PDLIM4P50479 330 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 ISXQ2M1V0 245 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 OCIAD2Q56VL3 154 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 GLRX5Q86SX6 157 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 GCSAMQ8N6F7 178 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 SHANK3Q9BYB0 1731 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 CCL20P78556 96 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 FAM201AQ5SY85 155 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 ZNRF1Q8ND25 227 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 AMBPP02760 352 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 COQ2Q96H96 371 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 IGKV1-8A0A0C4DH67 115 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 NEUROG1Q92886 237 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 TMEM106BQ9NUM4 274 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 OBSL1O75147 1896 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 MCRIP2Q9BUT9 160 aaKnown RBP6.69□□□□□ -1.34
CIITA-201ENST00000324288 CLEC7AQ9BXN2 247 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 MESP2Q0VG99 397 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 ASPHD2Q6ICH7 369 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 ADAMTSL5Q6ZMM2 481 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 TEX45Q8NA69 505 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 FGF11Q92914 225 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 MRPL52Q86TS9 123 aaKnown RBP6.69□□□□□ -1.34
CIITA-201ENST00000324288 SPTBN4Q9H254 2564 aa6.69□□□□□ -1.34
CIITA-201ENST00000324288 FAM27BQ5VT28 67 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 FAM214BQ7L5A3 538 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 KLF14Q8TD94 323 aaPredicted RBP6.68□□□□□ -1.34
CIITA-201ENST00000324288 TRAV24A0A0B4J272 114 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 MALP21145 153 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 NPPCP23582 126 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 GAGE13Q4V321 117 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 FBLIM1Q8WUP2 373 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 Q96M66 194 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 AHDC1Q5TGY3 1603 aaPredicted RBP6.68□□□□□ -1.34
CIITA-201ENST00000324288 CA11O75493 328 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 FXYD7P58549 80 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 RPL23P62829 140 aaKnown RBP6.68□□□□□ -1.34
CIITA-201ENST00000324288 LOXL4Q96JB6 756 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 OR10J3Q5JRS4 329 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 CFAP161Q6P656 301 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 BRCA1P38398 1863 aaKnown RBP6.68□□□□□ -1.34
CIITA-201ENST00000324288 DPM2O94777 84 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 LIMS1P48059 325 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 KIR3DL3Q8N743 410 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 SLC25A2Q9BXI2 301 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 SHISA5Q8N114 240 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 DRAM1Q8N682 238 aa6.68□□□□□ -1.34
CIITA-201ENST00000324288 DLL3Q9NYJ7 618 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms