RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 PRR20DP86480 221 aa11.05□□□□□ -0.64
CTTN-201ENST00000301843 PRR20BP86481 221 aa11.05□□□□□ -0.64
CTTN-201ENST00000301843 PRR20AP86496 221 aa11.05□□□□□ -0.64
CTTN-201ENST00000301843 DIAPH2-AS1Q14236 149 aa11.05□□□□□ -0.64
CTTN-201ENST00000301843 PTPRZ1P23471 2315 aaPredicted RBP11.05□□□□□ -0.64
CTTN-201ENST00000301843 TNFSF13O75888 250 aa11.05□□□□□ -0.64
CTTN-201ENST00000301843 GNG5P63218 68 aa11.05□□□□□ -0.64
CTTN-201ENST00000301843 TUBG2Q9NRH3 451 aa11.05□□□□□ -0.64
CTTN-201ENST00000301843 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
CTTN-201ENST00000301843 IGHG3P01860 377 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 GPX1P07203 203 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 CAMPP49913 170 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 SLAQ13239 276 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 TMEM183BQ1AE95 376 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 TIGITQ495A1 244 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 IBA57Q5T440 356 aaKnown RBP11.04□□□□□ -0.64
CTTN-201ENST00000301843 TEX43Q6ZNM6 134 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 BHLHA15Q7RTS1 189 aaPredicted RBP11.04□□□□□ -0.64
CTTN-201ENST00000301843 ERASQ7Z444 233 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 STARD4Q96DR4 205 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 MIEN1Q9BRT3 115 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 TMEM14BQ9NUH8 114 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 OTOGLQ3ZCN5 2332 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 ABCA4P78363 2273 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 TRGV10A0A0A0MS01 117 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 A0A1W2PS18 150 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 M0QZ24 198 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 CCL8P80075 99 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 GUSBP1Q15486 140 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 SPATA45Q537H7 98 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 LPAR2Q9HBW0 351 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 SLC45A2Q9UMX9 530 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 CORTO00230 105 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 TOX4O94842 621 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 CCL3L1P16619 93 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 BRS3P32247 399 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 TMPRSS3P57727 454 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 ZNF71Q9NQZ8 489 aaPredicted RBP11.04□□□□□ -0.64
CTTN-201ENST00000301843 BSNQ9UPA5 3926 aa11.04□□□□□ -0.64
CTTN-201ENST00000301843 BMPR1BO00238 502 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 MT-CO2P00403 227 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 PMCHL1Q16048 86 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 DKK4Q9UBT3 224 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 IL19Q9UHD0 177 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 PROCRQ9UNN8 238 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 GOLT1BQ9Y3E0 138 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 SPTA1P02549 2419 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 TEX50A0A1B0GTY4 177 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
CTTN-201ENST00000301843 CT45A6P0DMU7 189 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 CT45A5P0DMU8 189 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 CT45A7P0DMV0 189 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
CTTN-201ENST00000301843 UBE2L3P68036 154 aaKnown RBP11.03□□□□□ -0.64
CTTN-201ENST00000301843 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 RUSC1-AS1Q66K80 236 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 Q8N976 141 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 OR52E5Q8NH55 327 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 TMEM68Q96MH6 324 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 CDC42EP3Q9UKI2 254 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 TIMM8BQ9Y5J9 83 aaPredicted RBP11.03□□□□□ -0.64
CTTN-201ENST00000301843 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 SH2D7A6NKC9 451 aaPredicted RBP11.03□□□□□ -0.64
CTTN-201ENST00000301843 F2RL2O00254 374 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 IGLV2-8P01709 118 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 DEFB109BQ30KR1 87 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 SEM1Q6ZVN7 128 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 BLNKQ8WV28 456 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 ASCL2Q99929 193 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
CTTN-201ENST00000301843 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 ZNF891A8MT65 544 aaPredicted RBP11.02□□□□□ -0.65
CTTN-201ENST00000301843 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 NEUROG1Q92886 237 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 SPAARA0A1B0GVQ0 90 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 DLEU1O43261 78 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 USF1P22415 310 aaPredicted RBP11.02□□□□□ -0.65
CTTN-201ENST00000301843 KLF3P57682 345 aaPredicted RBP11.02□□□□□ -0.65
CTTN-201ENST00000301843 AARDQ4LEZ3 155 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 TRAT1Q6PIZ9 186 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 TXN2Q99757 166 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.65
CTTN-201ENST00000301843 MRPL20Q9BYC9 149 aaKnown RBP11.02□□□□□ -0.65
CTTN-201ENST00000301843 MRPL36Q9P0J6 103 aaKnown RBP11.02□□□□□ -0.65
CTTN-201ENST00000301843 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
CTTN-201ENST00000301843 CEP295Q9C0D2 2601 aa11.01□□□□□ -0.65
CTTN-201ENST00000301843 AREGP15514 252 aa11.01□□□□□ -0.65
CTTN-201ENST00000301843 MFAP2P55001 183 aa11.01□□□□□ -0.65
CTTN-201ENST00000301843 RPL8P62917 257 aaKnown RBP11.01□□□□□ -0.65
CTTN-201ENST00000301843 CX3CL1P78423 397 aa11.01□□□□□ -0.65
CTTN-201ENST00000301843 TMEM249Q2WGJ8 235 aa11.01□□□□□ -0.65
CTTN-201ENST00000301843 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
CTTN-201ENST00000301843 TECRQ9NZ01 308 aaKnown RBP11.01□□□□□ -0.65
CTTN-201ENST00000301843 IGLV1-44P01699 117 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms