RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 LYL1P12980 280 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 COX19Q49B96 90 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 PGLYRP4Q96LB8 373 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 SPRR3Q9UBC9 169 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 MPDU1O75352 247 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
HPS3-201ENST00000296051 NUTF2P61970 127 aaKnown RBP11.24□□□□□ -0.61
HPS3-201ENST00000296051 FAM90A2PQ658T7 463 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 PMCHL2Q9BQD1 86 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 CDH23Q9H251 3354 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 PCSK4Q6UW60 755 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 BPIFA4PQ86YQ2 179 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 C11orf44Q8N8P7 122 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 ZIC4Q8N9L1 334 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 TRAV24A0A0B4J272 114 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 ISLRO14498 428 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 NMUP48645 174 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 C10orf91Q5T1B1 145 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 C17orf82Q86X59 251 aaPredicted RBP11.23□□□□□ -0.61
HPS3-201ENST00000296051 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 PKIBQ9C010 78 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 NRN1Q9NPD7 142 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 PRR14LQ5THK1 2151 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 C17orf100A8MU93 164 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 IGFBP2P18065 325 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 DGAT2L7PQ6IED9 249 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 PRNTQ86SH4 94 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 NCOA6Q14686 2063 aaPredicted RBP11.23□□□□□ -0.61
HPS3-201ENST00000296051 REG1AP05451 166 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 TMEM45BQ96B21 275 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 PIEZO2Q9H5I5 2752 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 IL6RP08887 468 aaPredicted RBP11.23□□□□□ -0.61
HPS3-201ENST00000296051 MAS1LP35410 378 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 OR4A5Q8NH83 315 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 NABP1Q96AH0 204 aa11.23□□□□□ -0.61
HPS3-201ENST00000296051 CHD3Q12873 2000 aaKnown RBP11.23□□□□□ -0.61
HPS3-201ENST00000296051 A0A1W2PRX2 142 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 FADS6Q8N9I5 356 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 YTHDF2Q9Y5A9 579 aaKnown RBP11.22□□□□□ -0.61
HPS3-201ENST00000296051 K7ERU9 68 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 OR13A1Q8NGR1 328 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 SSBP4Q9BWG4 385 aaPredicted RBP11.22□□□□□ -0.61
HPS3-201ENST00000296051 ANKHD1Q8IWZ3 2542 aaKnown RBP11.22□□□□□ -0.61
HPS3-201ENST00000296051 NUDT3O95989 172 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 RPL8P62917 257 aaKnown RBP11.22□□□□□ -0.61
HPS3-201ENST00000296051 SAXO1Q8IYX7 474 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 C1orf162Q8NEQ5 155 aaPredicted RBP11.22□□□□□ -0.61
HPS3-201ENST00000296051 MBD3L1Q8WWY6 194 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 IL36BQ9NZH7 164 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 JMJD1CQ15652 2540 aa11.22□□□□□ -0.61
HPS3-201ENST00000296051 CEACAM18A8MTB9 384 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 CA2P00918 260 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
HPS3-201ENST00000296051 RBM14Q96PK6 669 aaKnown RBP11.21□□□□□ -0.61
HPS3-201ENST00000296051 ZFYVE26Q68DK2 2539 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 NAV2Q8IVL1 2488 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 FNDC1Q4ZHG4 1894 aaPredicted RBP11.21□□□□□ -0.61
HPS3-201ENST00000296051 IGHV3OR16-13A0A075B7E8 117 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 IGHV3-74A0A0B4J1X5 117 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 IGKV1-5P01602 117 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 MIR17HGQ75NE6 70 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 C5orf17Q8NAS9 161 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 KCNS1Q96KK3 526 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 LAMTOR2Q9Y2Q5 125 aa11.21□□□□□ -0.61
HPS3-201ENST00000296051 GAGE10A6NGK3 116 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 J3QR89 54 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 Q1RN00 199 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 C1QTNF5Q9BXJ0 243 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 METRNQ9UJH8 293 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 KLF2Q9Y5W3 355 aaPredicted RBP11.21□□□□□ -0.62
HPS3-201ENST00000296051 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 CRYGSP22914 178 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 RND2P52198 227 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 PRR30Q53SZ7 412 aaPredicted RBP11.21□□□□□ -0.62
HPS3-201ENST00000296051 STXBP6Q8NFX7 210 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.62
HPS3-201ENST00000296051 XIRP2A4UGR9 3374 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 PMCHL1Q16048 86 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 SEMA5BQ9P283 1151 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 K7ENP7 123 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 PTGDSP41222 190 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 MRPL37Q9BZE1 423 aaKnown RBP11.2□□□□□ -0.62
HPS3-201ENST00000296051 ORM1P02763 201 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 GBGT1Q8N5D6 347 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 NPIPB3Q92617 1050 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 DPM3Q9P2X0 92 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 FASNP49327 2511 aaKnown RBP11.2□□□□□ -0.62
HPS3-201ENST00000296051 CGB1A6NKQ9 187 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 A8MWL6 223 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 A8MWP6 167 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 CORTO00230 105 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 AMY1AP04745 511 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms