RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 FNDC10F2Z333 226 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 DVL1O14640 695 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 OR10J1P30954 320 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 FAM3BP58499 235 aaPredicted RBP10.47□□□□□ -0.73
CPSF6-201ENST00000266679 MLANAQ16655 118 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 C2orf83Q53S99 150 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 DMRTC2Q8IXT2 367 aaPredicted RBP10.47□□□□□ -0.73
CPSF6-201ENST00000266679 TXNDC17Q9BRA2 123 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 FKBP11Q9NYL4 201 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 SLC45A2Q9UMX9 530 aa10.47□□□□□ -0.73
CPSF6-201ENST00000266679 IGKV1OR2-108A0A075B7D4 117 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 MDFIC2A0A1B0GVS7 189 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 VSTM5A8MXK1 200 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 MT-CO2P00403 227 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 LOXP28300 417 aaPredicted RBP10.46□□□□□ -0.73
CPSF6-201ENST00000266679 TMEM144Q7Z5S9 345 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 OR5B3Q8NH48 314 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 NABP2Q9BQ15 211 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 COMMD5Q9GZQ3 224 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 PITPNC1Q9UKF7 332 aa10.46□□□□□ -0.73
CPSF6-201ENST00000266679 ROS1P08922 2347 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 A0A0U1RQK1 487 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 GAMTQ14353 236 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM177Q53S58 311 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 OR5AN1Q8NGI8 311 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 OR1L8Q8NGR8 309 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 OR9G1Q8NH87 305 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 FLYWCH2Q96CP2 140 aaKnown RBP10.46□□□□□ -0.74
CPSF6-201ENST00000266679 FUT9Q9Y231 359 aa10.46□□□□□ -0.74
CPSF6-201ENST00000266679 TNFRSF13BO14836 293 aaPredicted RBP10.45□□□□□ -0.74
CPSF6-201ENST00000266679 RD3LP0DJH9 198 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 CD99P14209 185 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 IL3RAP26951 378 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 RPL8P62917 257 aaKnown RBP10.45□□□□□ -0.74
CPSF6-201ENST00000266679 PSG5Q15238 335 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 C10orf55Q5SWW7 151 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 SFRP2Q96HF1 295 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 XKRY2A2RUG3 117 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 E7EUB6 86 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 RBPJQ06330 500 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 OR1P1Q8NH06 330 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 UHRF2Q96PU4 802 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 NGBQ9NPG2 151 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 NDUFA4L2Q9NRX3 87 aa10.45□□□□□ -0.74
CPSF6-201ENST00000266679 CSMD2Q7Z408 3487 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 TYMSP04818 313 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 COL8A1P27658 744 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 DLX6P56179 175 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 CD69Q07108 199 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 SSX8Q7RTT4 187 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 PDPNQ86YL7 162 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM37Q8WXS4 190 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 ACY3Q96HD9 319 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 SLC35E1Q96K37 410 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 PACRGQ96M98 296 aaPredicted RBP10.44□□□□□ -0.74
CPSF6-201ENST00000266679 HIST1H2BLQ99880 126 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 PKDREJQ9NTG1 2253 aa10.44□□□□□ -0.74
CPSF6-201ENST00000266679 ZNF320A2RRD8 509 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 OR7C2O60412 319 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 IGHV2-70P01814 119 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 USF1P22415 310 aaPredicted RBP10.43□□□□□ -0.74
CPSF6-201ENST00000266679 ERHP84090 104 aaKnown RBP10.43□□□□□ -0.74
CPSF6-201ENST00000266679 PRSS8Q16651 343 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 OR2T6Q8NHC8 308 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM186Q96B77 213 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 WASHC3Q9Y3C0 194 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 DCHS2Q6V1P9 2916 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 ARFGEF3Q5TH69 2177 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 TRBV23-1A0A0A0MS06 115 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 IGHV1-69-2A0A0G2JMI3 117 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 PLAUP00749 431 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 SSBP2P81877 361 aaPredicted RBP10.43□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM155Q4W5P6 130 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 FAM71F2Q6NXP2 309 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 TGIF2LXQ8IUE1 241 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 LINC00311Q8N616 119 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 OR4C13Q8NGP0 309 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM167AQ8TBQ9 72 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 C11orf52Q96A22 123 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 TPSG1Q9NRR2 321 aa10.43□□□□□ -0.74
CPSF6-201ENST00000266679 TECRQ9NZ01 308 aaKnown RBP10.43□□□□□ -0.74
CPSF6-201ENST00000266679 IGHV3-72A0A0B4J1Y9 119 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 CGB1A6NKQ9 187 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 K7EN84 100 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 CD3EP07766 207 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 DLX1P56177 255 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 ATP5IP56385 69 aaPredicted RBP10.42□□□□□ -0.74
CPSF6-201ENST00000266679 PRB3Q04118 309 aaPredicted RBP10.42□□□□□ -0.74
CPSF6-201ENST00000266679 TEX38Q6PEX7 206 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 OR10G8Q8NGN5 311 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 SGMS2Q8NHU3 365 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 ZNF503Q96F45 646 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 PFDN5Q99471 154 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 ZNF430Q9H8G1 570 aaPredicted RBP10.42□□□□□ -0.74
CPSF6-201ENST00000266679 ABCA12Q86UK0 2595 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.42□□□□□ -0.74
CPSF6-201ENST00000266679 A0A1W2PN81 502 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms