RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 OR11H12B2RN74 326 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 MIR17HGQ75NE6 70 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 OR11H1Q8NG94 326 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 OR11H2Q8NH07 326 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 GAGE10A6NGK3 116 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 RNASE4P34096 147 aaKnown RBP14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 PRB3Q04118 309 aaPredicted RBP14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 BIVMQ86UB2 503 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 ZNF525Q8N782 197 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 CBLN1P23435 193 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 FOXA3P55318 350 aaPredicted RBP14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 GATA2P23769 480 aaPredicted RBP14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 TMEM170BQ5T4T1 132 aa14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 CARHSP1Q9Y2V2 147 aaKnown RBP14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 SOX21Q9Y651 276 aaPredicted RBP14.06□□□□□ -0.16
CROCCP3-201ENST00000263511 IGKV1D-13A0A0B4J2D9 117 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 IGKV1-13P0DP09 117 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 LINC00469Q8N7U9 141 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 IL36BQ9NZH7 164 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 A0A1B0GW15 77 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 RHOGP84095 191 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 ZNF600Q6ZNG1 722 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 C8orf46Q8TAG6 207 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 RPP21Q9H633 154 aaKnown RBP14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 SCO2A0A1W2PP80 73 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 HTN3P15516 51 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 LDLRAD2Q5SZI1 272 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 ZNF414Q96IQ9 312 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 OR13C6PQ8NH95 151 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 OTORQ9NRC9 128 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 WNT2P09544 360 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 CD24P25063 80 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 ZNF672Q499Z4 452 aaPredicted RBP14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 STHQ8IWL8 128 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 TMEM167AQ8TBQ9 72 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 C2orf88Q9BSF0 95 aa14.05□□□□□ -0.16
CROCCP3-201ENST00000263511 PSME4Q14997 1843 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 HEATR5BQ9P2D3 2071 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 TRAV40A0A0B4J280 105 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 TIMM23O14925 209 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 EFNA4P52798 201 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 EMP1P54849 157 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 ATRAIDQ6UW56 229 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 RNF125Q96EQ8 232 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 SCGB1A1P11684 91 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 CRYGSP22914 178 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 GGNQ86UU5 652 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 FER1L6-AS1Q8NA97 138 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 MRAP2Q96G30 205 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 KCNS1Q96KK3 526 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 F11RQ9Y624 299 aaKnown RBP14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 OR9G9P0C7N8 305 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 FAM89BQ8N5H3 189 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 FGFBP3Q8TAT2 258 aa14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 PARD6GQ9BYG4 376 aaPredicted RBP14.04□□□□□ -0.16
CROCCP3-201ENST00000263511 DUSP14O95147 198 aaKnown RBP14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 PMCHL2Q9BQD1 86 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 TRAV14DV4A0A0A6YYC5 116 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 LINC00587B1AMM8 73 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 ATP5LO75964 103 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 ATP5G3P48201 142 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 TMEM160Q9NX00 188 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 SIPA1L1O43166 1804 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 GCSAMLQ5JQS6 135 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 C18orf12Q96KH6 178 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 ZNF319Q9P2F9 582 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 C20orf204Q6ZNR8 217 aa14.03□□□□□ -0.16
CROCCP3-201ENST00000263511 TCRBV4S1A1TA0A5B7 111 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 SLC17A3O00476 420 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 TFF1P04155 84 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 LEPP41159 167 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 WFIKKN1Q96NZ8 548 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 ASCL2Q99929 193 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 RALGAPA2Q2PPJ7 1873 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 ZNF236Q9UL36 1845 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 ACACAQ13085 2346 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 LEMD1Q68G75 181 aa14.02□□□□□ -0.16
CROCCP3-201ENST00000263511 SCGB3A1Q96QR1 104 aa14.02□□□□□ -0.17
CROCCP3-201ENST00000263511 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.17
CROCCP3-201ENST00000263511 SRRM5B3KS81 715 aa14.02□□□□□ -0.17
CROCCP3-201ENST00000263511 EFNA2O43921 213 aa14.02□□□□□ -0.17
CROCCP3-201ENST00000263511 DUTP33316 252 aaKnown RBP14.02□□□□□ -0.17
CROCCP3-201ENST00000263511 H3BRM9 83 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 DNAL4O96015 105 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 PRCDQ00LT1 54 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 C18orf15Q96N68 181 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 MUC21A0A0G2JKD1 596 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 MUC21A0A140T8X8 626 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 SRP19P09132 144 aaKnown RBP14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 MUC21Q5SSG8 566 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 SLC25A28Q96A46 364 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 EFNB1P98172 346 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 UNQ6494/PRO21346Q6UXR6 183 aa14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 APOHP02749 345 aaPredicted RBP14.01□□□□□ -0.17
CROCCP3-201ENST00000263511 FOXG1P55316 489 aaPredicted RBP14□□□□□ -0.17
CROCCP3-201ENST00000263511 RIF1Q5UIP0 2472 aaKnown RBP14□□□□□ -0.17
CROCCP3-201ENST00000263511 FAM90A9PA6NNJ1 464 aa14□□□□□ -0.17
CROCCP3-201ENST00000263511 FAM71F2Q6NXP2 309 aa14□□□□□ -0.17
CROCCP3-201ENST00000263511 RAMP3O60896 148 aa14□□□□□ -0.17
CROCCP3-201ENST00000263511 SOD3P08294 240 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms