RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 EFNA4P52798 201 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 ZNF672Q499Z4 452 aaPredicted RBP15.77■□□□□ 0.12
PTPRE-201ENST00000254667 ZCCHC24Q8N2G6 241 aaKnown RBP15.77■□□□□ 0.12
PTPRE-201ENST00000254667 TMEM190Q8WZ59 177 aa15.77■□□□□ 0.12
PTPRE-201ENST00000254667 C9JCJ5 164 aa15.77■□□□□ 0.12
PTPRE-201ENST00000254667 FOXG1P55316 489 aaPredicted RBP15.77■□□□□ 0.12
PTPRE-201ENST00000254667 C20orf204Q6ZNR8 217 aa15.77■□□□□ 0.12
PTPRE-201ENST00000254667 TNFRSF18Q9Y5U5 241 aa15.77■□□□□ 0.12
PTPRE-201ENST00000254667 TCRBV4S1A1TA0A5B7 111 aa15.77■□□□□ 0.11
PTPRE-201ENST00000254667 MBD3L4A6NDZ8 208 aaPredicted RBP15.77■□□□□ 0.11
PTPRE-201ENST00000254667 MBD3L3A6NE82 208 aaPredicted RBP15.77■□□□□ 0.11
PTPRE-201ENST00000254667 MBD3L5A6NJ08 208 aaPredicted RBP15.77■□□□□ 0.11
PTPRE-201ENST00000254667 MBD3L2Q8NHZ7 208 aaPredicted RBP15.77■□□□□ 0.11
PTPRE-201ENST00000254667 SIP14410 1827 aa15.77■□□□□ 0.11
PTPRE-201ENST00000254667 CBLN1P23435 193 aa15.77■□□□□ 0.11
PTPRE-201ENST00000254667 ATP5G3P48201 142 aa15.77■□□□□ 0.11
PTPRE-201ENST00000254667 FAM166AQ6J272 317 aa15.77■□□□□ 0.11
PTPRE-201ENST00000254667 BIVMQ86UB2 503 aa15.77■□□□□ 0.11
PTPRE-201ENST00000254667 PRELID3AQ96N28 172 aa15.77■□□□□ 0.11
PTPRE-201ENST00000254667 IGHG3P01860 377 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 RNF125Q96EQ8 232 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 GPR61Q9BZJ8 451 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 RAMP3O60896 148 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 OR9G9P0C7N8 305 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 TCTAP57738 103 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 ITLN2Q8WWU7 325 aaPredicted RBP15.76■□□□□ 0.11
PTPRE-201ENST00000254667 HIST1H4GQ99525 98 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 JOSD1Q15040 202 aaPredicted RBP15.76■□□□□ 0.11
PTPRE-201ENST00000254667 OOSP1A8MZH6 123 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 M0R381 172 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 HEPN1Q6WQI6 88 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 TMEM136Q6ZRR5 245 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 WFIKKN1Q96NZ8 548 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 RALGAPA1Q6GYQ0 2036 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 GVINP1Q7Z2Y8 2422 aa15.76■□□□□ 0.11
PTPRE-201ENST00000254667 LY6G6FQ5SQ64 297 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 DNLZQ5SXM8 178 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 KLK15Q9H2R5 256 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 SDF2L1Q9HCN8 221 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 A8MXK9 166 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 LYNX1G3V0Z9 82 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 TIMM23O14925 209 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 LYNX1P0DP58 116 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 TMEM183AQ8IXX5 376 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 DUX3Q96PT4 197 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 GRIFINA4D1Z8 144 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 FABP2P12104 132 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 Q6ZS92 163 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 ASCL2Q99929 193 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 ZNF257Q9Y2Q1 563 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 MRPS16Q9Y3D3 137 aaKnown RBP15.75■□□□□ 0.11
PTPRE-201ENST00000254667 ZSWIM8A7E2V4 1837 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 IGHV3-11P01762 117 aa15.75■□□□□ 0.11
PTPRE-201ENST00000254667 GATA2P23769 480 aaPredicted RBP15.75■□□□□ 0.11
PTPRE-201ENST00000254667 TMEM101Q96IK0 257 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 WNT2P09544 360 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 REC114Q7Z4M0 266 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 SMIM12Q96EX1 92 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 DMRTA2Q96SC8 542 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 RNF5Q99942 180 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 A0A1W2PRE2 83 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 RHOGP84095 191 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 FER1L6-AS1Q8NA97 138 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 KCNS1Q96KK3 526 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 ANK1P16157 1881 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 C7orf71A4D174 169 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 F8VVB4 439 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 F8VWA3 439 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 ATP5LO75964 103 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 PRSS2P07478 247 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 CCL20P78556 96 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 PSMG4Q5JS54 123 aa15.74■□□□□ 0.11
PTPRE-201ENST00000254667 PNRC2Q9NPJ4 139 aaKnown RBP15.74■□□□□ 0.11
PTPRE-201ENST00000254667 ZNF256Q9Y2P7 627 aaPredicted RBP15.74■□□□□ 0.11
PTPRE-201ENST00000254667 METRNQ9UJH8 293 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 IGKV1D-8A0A087WSZ0 117 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 LDLRAD4O15165 306 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 B3GALT5-AS1P59052 145 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 LHFPL1Q86WI0 220 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 TMEM178BH3BS89 294 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 DUSP14O95147 198 aaKnown RBP15.73■□□□□ 0.11
PTPRE-201ENST00000254667 MEIG1Q5JSS6 88 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 FAM169BQ8N8A8 192 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 ZNF414Q96IQ9 312 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 IZUMO1RA6ND01 250 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 ST6GALNAC3Q8NDV1 305 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 WDR83OSQ9Y284 106 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 SDK2Q58EX2 2172 aa15.73■□□□□ 0.11
PTPRE-201ENST00000254667 THADAQ6YHU6 1953 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 SLC17A3O00476 420 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 MINOS1Q5TGZ0 78 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 MINOS1-NBL1R4GNA1 71 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 FABP5P3A8MUU1 101 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 LEPP41159 167 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 TMEM42Q69YG0 159 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 IGHV2-26A0A0B4J1V2 119 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 TFF1P04155 84 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 OR11H12B2RN74 326 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 OR11H1Q8NG94 326 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms