RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ERHP84090 104 aaKnown RBP15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 RITA1Q96K30 269 aa15.8■□□□□ 0.12
CDC42EP1-201ENST00000249014 TRBV23-1A0A0A0MS06 115 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 INS-IGF2F8WCM5 200 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 DLL1O00548 723 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR5G3P0C626 314 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 AREGP15514 252 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 UHRF2Q96PU4 802 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 ZNF430Q9H8G1 570 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 TECRQ9NZ01 308 aaKnown RBP15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 WASHC3Q9Y3C0 194 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 PLXNB1O43157 2135 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 A0A087X0M5 115 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 IGHV1-69-2A0A0G2JMI3 117 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 A0A1B0GX30 115 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 PLAUP00749 431 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 AMBPP02760 352 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 IGHV1-8P0DP01 117 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 ZNF137PP52743 207 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 SSBP2P81877 361 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 HLA-DRB5Q30154 266 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR10G8Q8NGN5 311 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 ACY3Q96HD9 319 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 PRDM13Q9H4Q3 707 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 TPSG1Q9NRR2 321 aa15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 TLN1Q9Y490 2541 aaKnown RBP15.79■□□□□ 0.12
CDC42EP1-201ENST00000249014 TRAV20A0A0B4J274 112 aa15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 PDLIM4P50479 330 aa15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 PNKDQ8N490 385 aa15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR4A5Q8NH83 315 aa15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 VSTM2AQ8TAG5 236 aa15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 CACNG8Q8WXS5 425 aa15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 FNDC4Q9H6D8 234 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 TMEM167BQ9NRX6 74 aa15.78■□□□□ 0.12
CDC42EP1-201ENST00000249014 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 C9JCJ5 164 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR7C2O60412 319 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 OR10J4P0C629 311 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 HIST1H1BP16401 226 aaKnown RBP15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 APOBEC3AP31941 199 aaPredicted RBP15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 DLX1P56177 255 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 MORN5Q5VZ52 161 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 TGIF2LXQ8IUE1 241 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 EAF1Q96JC9 268 aaPredicted RBP15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 ARL2-SNX15V9GYD0 113 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 PTPRQQ9UMZ3 2332 aa15.77■□□□□ 0.12
CDC42EP1-201ENST00000249014 PSMB11A5LHX3 300 aa15.77■□□□□ 0.11
CDC42EP1-201ENST00000249014 GPX4P36969 197 aaPredicted RBP15.77■□□□□ 0.11
CDC42EP1-201ENST00000249014 RBPJQ06330 500 aa15.77■□□□□ 0.11
CDC42EP1-201ENST00000249014 MRGPRG-AS1Q2M3A8 158 aa15.77■□□□□ 0.11
CDC42EP1-201ENST00000249014 VKORC1Q9BQB6 163 aa15.77■□□□□ 0.11
CDC42EP1-201ENST00000249014 CHODLQ9H9P2 273 aa15.77■□□□□ 0.11
CDC42EP1-201ENST00000249014 A0A1W2PN81 502 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 SLC25A17O43808 307 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 IGHV3-48P01763 117 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 CRYBB3P26998 211 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 PQLC2Q6ZP29 291 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 PFDN5Q99471 154 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 SLC25A33Q9BSK2 321 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 C19orf24Q9BVV8 132 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 TRAPPC1Q9Y5R8 145 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 IGHV3-72A0A0B4J1Y9 119 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 GGTLC3B5MD39 225 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 LYNX1G3V0Z9 82 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 SLC17A3O00476 420 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 LYNX1P0DP58 116 aa15.76■□□□□ 0.11
CDC42EP1-201ENST00000249014 PRB3Q04118 309 aaPredicted RBP15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 TMEM133Q9H2Q1 129 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 RELNP78509 3460 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 TRAV5A0A0B4J249 113 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 B9A039 149 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 CD3EP07766 207 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 CNN1P51911 297 aaKnown RBP15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 TAS2R45P59539 299 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 OR5I1Q13606 314 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 LINC01560Q8TB33 94 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 MRPL36Q9P0J6 103 aaKnown RBP15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 LY96Q9Y6Y9 160 aa15.75■□□□□ 0.11
CDC42EP1-201ENST00000249014 A0A1W2PPI3 338 aa15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 REG1AP05451 166 aa15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 C8orf88P0DMB2 117 aa15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 CENPWQ5EE01 88 aa15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 RNASEH2CQ8TDP1 164 aaKnown RBP15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 BTF3L4Q96K17 158 aa15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 FAM167A-AS1Q96KT0 104 aa15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 SLC25A2Q9BXI2 301 aa15.74■□□□□ 0.11
CDC42EP1-201ENST00000249014 HELTA6NFD8 242 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 C9orf152Q5JTZ5 239 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 NPIPB3Q92617 1050 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 IL36BQ9NZH7 164 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 IGKV1D-37A0A075B6S9 117 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 ENSAO43768 121 aaKnown RBP15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 GRNP28799 593 aaKnown RBP15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 MC5RP33032 325 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 PPOXP50336 477 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 ZNF90Q03938 601 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 VMA21Q3ZAQ7 101 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 DNLZQ5SXM8 178 aa15.73■□□□□ 0.11
CDC42EP1-201ENST00000249014 GNG4P50150 75 aa15.72■□□□□ 0.11
CDC42EP1-201ENST00000249014 SUMO1P63165 101 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms