RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 RPL27AP46776 148 aaKnown RBP12.2□□□□□ -0.46
DDX49-201ENST00000247003 C11orf71Q6IPW1 123 aa12.2□□□□□ -0.46
DDX49-201ENST00000247003 KCNIP4Q6PIL6 250 aa12.2□□□□□ -0.46
DDX49-201ENST00000247003 PQLC2Q6ZP29 291 aa12.2□□□□□ -0.46
DDX49-201ENST00000247003 MIR17HGQ75NE6 70 aa12.2□□□□□ -0.46
DDX49-201ENST00000247003 OR5T1Q8NG75 326 aa12.2□□□□□ -0.46
DDX49-201ENST00000247003 SSX3Q99909 188 aa12.2□□□□□ -0.46
DDX49-201ENST00000247003 TPSG1Q9NRR2 321 aa12.2□□□□□ -0.46
DDX49-201ENST00000247003 A0A1W2PPI3 338 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 E7EUB6 86 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 PPP1R2P9O14990 202 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 OR7C2O60412 319 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 OR5G3P0C626 314 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 NPPCP23582 126 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 BPIFB3P59826 476 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 PSG5Q15238 335 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 PRSS8Q16651 343 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 PFDN5Q99471 154 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 C12orf57Q99622 126 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 CHODLQ9H9P2 273 aa12.19□□□□□ -0.46
DDX49-201ENST00000247003 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
DDX49-201ENST00000247003 SMG1Q96Q15 3661 aaKnown RBP12.18□□□□□ -0.46
DDX49-201ENST00000247003 MDFIC2A0A1B0GVS7 189 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 SCO2A0A1W2PP80 73 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 CGB1A6NKQ9 187 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 CD99P14209 185 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 LINC01551Q86U37 167 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 OR2T6Q8NHC8 308 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 PRORYQ9H606 182 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 ITPR1Q14643 2758 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 ADGRG4Q8IZF6 3080 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 CORTO00230 105 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 FOXH1O75593 365 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 LY6HO94772 140 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 TRGC2P03986 189 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
DDX49-201ENST00000247003 SRP14P37108 136 aaKnown RBP12.18□□□□□ -0.46
DDX49-201ENST00000247003 CEACAM3P40198 252 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 DLX1P56177 255 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 SELENOTP62341 195 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 PLGLAQ15195 96 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 MLANAQ16655 118 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 LY6G5BQ8NDX9 201 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 RITA1Q96K30 269 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 DERL1Q9BUN8 251 aa12.18□□□□□ -0.46
DDX49-201ENST00000247003 SSBP3Q9BWW4 388 aaPredicted RBP12.18□□□□□ -0.46
DDX49-201ENST00000247003 ZNF98A6NK75 572 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 PPP5D1E7EU14 171 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 COX7A2P2O60397 106 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 REG1AP05451 166 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 SOD3P08294 240 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 MEOX2P50222 304 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 PRB3Q04118 309 aaPredicted RBP12.17□□□□□ -0.46
DDX49-201ENST00000247003 PPP1R27Q86WC6 154 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 BTF3L4Q96K17 158 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 RNF5Q99942 180 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 SIGLEC9Q9Y336 463 aa12.17□□□□□ -0.46
DDX49-201ENST00000247003 ANKHD1Q8IWZ3 2542 aaKnown RBP12.17□□□□□ -0.46
DDX49-201ENST00000247003 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 M0R1W7 72 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 PFN1P07737 140 aaKnown RBP12.16□□□□□ -0.46
DDX49-201ENST00000247003 AREGP15514 252 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 HTR1DP28221 377 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 COMPP49747 757 aaPredicted RBP12.16□□□□□ -0.46
DDX49-201ENST00000247003 NDUFA6P56556 154 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 DTX2Q86UW9 622 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 NPIPB3Q92617 1050 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 LOC105371242A0A075B767 164 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 IGLC7A0M8Q6 106 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 C22orf46C9J442 243 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 SMIM6P0DI80 62 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 THAP8Q8NA92 274 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 C11orf52Q96A22 123 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
DDX49-201ENST00000247003 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 DNAJC4Q9NNZ3 241 aa12.16□□□□□ -0.46
DDX49-201ENST00000247003 SPTA1P02549 2419 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 TNCP24821 2201 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 A0A1W2PPQ1 181 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 CRYGBP07316 175 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 CNTFRP26992 372 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 ARF6P62330 175 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
DDX49-201ENST00000247003 TPTE2P1Q5T6R2 138 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 C10orf113Q5VZT2 155 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 SFRP2Q96HF1 295 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms