RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PTPRQQ9UMZ3 2332 aa17.79■□□□□ 0.44
RNF39-201ENST00000244360 APOBEC3AP31941 199 aaPredicted RBP17.79■□□□□ 0.44
RNF39-201ENST00000244360 ZNF137PP52743 207 aa17.79■□□□□ 0.44
RNF39-201ENST00000244360 TMEM155Q4W5P6 130 aa17.79■□□□□ 0.44
RNF39-201ENST00000244360 OR1L8Q8NGR8 309 aa17.79■□□□□ 0.44
RNF39-201ENST00000244360 ST6GALNAC6Q969X2 333 aa17.79■□□□□ 0.44
RNF39-201ENST00000244360 IL36BQ9NZH7 164 aa17.79■□□□□ 0.44
RNF39-201ENST00000244360 TMEM186Q96B77 213 aa17.78■□□□□ 0.44
RNF39-201ENST00000244360 TLN1Q9Y490 2541 aaKnown RBP17.78■□□□□ 0.44
RNF39-201ENST00000244360 B9A039 149 aa17.78■□□□□ 0.44
RNF39-201ENST00000244360 INS-IGF2F8WCM5 200 aa17.78■□□□□ 0.44
RNF39-201ENST00000244360 UNQ6494/PRO21346Q6UXR6 183 aa17.78■□□□□ 0.44
RNF39-201ENST00000244360 NABP2Q9BQ15 211 aa17.78■□□□□ 0.44
RNF39-201ENST00000244360 C2orf88Q9BSF0 95 aa17.78■□□□□ 0.44
RNF39-201ENST00000244360 SEPSECSQ9HD40 501 aaKnown RBP17.78■□□□□ 0.44
RNF39-201ENST00000244360 CD3EP07766 207 aa17.77■□□□□ 0.44
RNF39-201ENST00000244360 LINC00869P0C866 280 aa17.77■□□□□ 0.44
RNF39-201ENST00000244360 RNASE2P10153 161 aaKnown RBP17.77■□□□□ 0.44
RNF39-201ENST00000244360 IGFBP2P18065 325 aa17.77■□□□□ 0.44
RNF39-201ENST00000244360 PDPNQ86YL7 162 aa17.77■□□□□ 0.44
RNF39-201ENST00000244360 NDUFA4L2Q9NRX3 87 aa17.77■□□□□ 0.44
RNF39-201ENST00000244360 TMEM167BQ9NRX6 74 aa17.77■□□□□ 0.44
RNF39-201ENST00000244360 SLC45A2Q9UMX9 530 aa17.77■□□□□ 0.44
RNF39-201ENST00000244360 DCHS1Q96JQ0 3298 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 IGHV1-69-2A0A0G2JMI3 117 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.76■□□□□ 0.43
RNF39-201ENST00000244360 SELENOTP62341 195 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 PRSS8Q16651 343 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 FBXL19-AS1Q494R0 122 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 OR10X1Q8NGY0 326 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 OR4A5Q8NH83 315 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 TNCP24821 2201 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 ZNF90Q03938 601 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 TMEM167AQ8TBQ9 72 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 FLYWCH2Q96CP2 140 aaKnown RBP17.76■□□□□ 0.43
RNF39-201ENST00000244360 SLC35E1Q96K37 410 aa17.76■□□□□ 0.43
RNF39-201ENST00000244360 PKDREJQ9NTG1 2253 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 RPL8P62917 257 aaKnown RBP17.75■□□□□ 0.43
RNF39-201ENST00000244360 OR4P4Q8NGL7 312 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 OR4C13Q8NGP0 309 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 USF1P22415 310 aaPredicted RBP17.75■□□□□ 0.43
RNF39-201ENST00000244360 ADMP35318 185 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 REG1BP48304 166 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 TAS2R60P59551 318 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 SPATA31B1PQ5VZV4 182 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 C19orf24Q9BVV8 132 aa17.75■□□□□ 0.43
RNF39-201ENST00000244360 ARFGEF3Q5TH69 2177 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 CHRNB4P30926 498 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 SSX2Q16385 188 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 OR9G1Q8NH87 305 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 EAF1Q96JC9 268 aaPredicted RBP17.74■□□□□ 0.43
RNF39-201ENST00000244360 CA7P43166 264 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 RPL19P84098 196 aaKnown RBP17.74■□□□□ 0.43
RNF39-201ENST00000244360 DIAPH2-AS1Q14236 149 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 VSTM2AQ8TAG5 236 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 COMMD5Q9GZQ3 224 aa17.74■□□□□ 0.43
RNF39-201ENST00000244360 ADGRG4Q8IZF6 3080 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 IGKV1OR2-108A0A075B7D4 117 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 A0A1B0GV90 55 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 IGHV1-8P0DP01 117 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 RAB4BP61018 213 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 PNKDQ8N490 385 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 C11orf42Q8N5U0 333 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 OR10W1Q8NGF6 305 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 TECRQ9NZ01 308 aaKnown RBP17.73■□□□□ 0.43
RNF39-201ENST00000244360 WASHC3Q9Y3C0 194 aa17.73■□□□□ 0.43
RNF39-201ENST00000244360 TRBV9A0A0B4J1U6 114 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 K7EN84 100 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 IGLV2-23P01705 113 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 CASP6P55212 293 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 RPEL1Q2QD12 228 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 MOB3BQ86TA1 216 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 CMTM2Q8TAZ6 248 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 COL25A1Q9BXS0 654 aaPredicted RBP17.72■□□□□ 0.43
RNF39-201ENST00000244360 FSTL3O95633 263 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 PLAUP00749 431 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 HNF1AP20823 631 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 UCNP55089 124 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 PAFAH1B2P68402 229 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 CD69Q07108 199 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 PQLC2Q6ZP29 291 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 FAM122AQ96E09 287 aa17.72■□□□□ 0.43
RNF39-201ENST00000244360 FOXH1O75593 365 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 SCGB1D1O95968 90 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 ESDP10768 282 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 OR10J1P30954 320 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 LGALS4P56470 323 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 TAS2R45P59539 299 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 TMEM256Q8N2U0 113 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 CACNG8Q8WXS5 425 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 MS4A10Q96PG2 267 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 SMG1Q96Q15 3661 aaKnown RBP17.71■□□□□ 0.43
RNF39-201ENST00000244360 A0A1W2PN81 502 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 DLL1O00548 723 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 OR10J4P0C629 311 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 MIR17HGQ75NE6 70 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 TGIF2LXQ8IUE1 241 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 NAGKQ9UJ70 344 aa17.71■□□□□ 0.43
RNF39-201ENST00000244360 POLEQ07864 2286 aa17.71■□□□□ 0.42
RNF39-201ENST00000244360 CGB1A6NKQ9 187 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms