RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TMEM204Q9BSN7 226 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 PRRG4Q9BZD6 226 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 TMEM191AQ9H0A3 160 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.61
GABPB1-201ENST00000220429 GNG4P50150 75 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 FOXE3Q13461 319 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 BOD1L2Q8IYS8 172 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 OSR2Q8N2R0 312 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 TPRX1Q8N7U7 411 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 RAB37Q96AX2 223 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 GPR82Q96P67 336 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 PMCHL2Q9BQD1 86 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 CLCF1Q9UBD9 225 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 ZNF257Q9Y2Q1 563 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 SCO2A0A1W2PP80 73 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 AESQ08117 197 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 IZUMO4Q1ZYL8 232 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 ZDHHC23Q8IYP9 409 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 KLF13Q9Y2Y9 288 aaPredicted RBP11.26□□□□□ -0.61
GABPB1-201ENST00000220429 CFAP47Q6ZTR5 3102 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
GABPB1-201ENST00000220429 FAM87AP0C7U9 286 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 SPANXB1Q9NS25 103 aaPredicted RBP11.26□□□□□ -0.61
GABPB1-201ENST00000220429 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
GABPB1-201ENST00000220429 ESPL1Q14674 2120 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 C5orf49A4QMS7 147 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 TNFRSF13BO14836 293 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 ARL3P36405 182 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 DAZAP2Q15038 168 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 PDCD1Q15116 288 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 SMIM20Q8N5G0 67 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 EP300Q09472 2414 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 CA1P00915 261 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 COX8AP10176 69 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 SLC35E4Q6ICL7 350 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 Q6ZRM9 215 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 SPAG8Q99932 426 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 TXNDC17Q9BRA2 123 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 FGF23Q9GZV9 251 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 TECRQ9NZ01 308 aaKnown RBP11.25□□□□□ -0.61
GABPB1-201ENST00000220429 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
GABPB1-201ENST00000220429 H0Y980 276 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 ATP5G2Q06055 141 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 ZNF611Q8N823 705 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 C5orf30Q96GV9 206 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 DMXL1Q9Y485 3027 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 VWC2LB2RUY7 222 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 SNAI2O43623 268 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 RBM11P57052 281 aaKnown RBP11.24□□□□□ -0.61
GABPB1-201ENST00000220429 IGF2-ASQ6U949 168 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 Q6ZPA2 131 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 DEFB127Q9H1M4 99 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 CACNG5Q9UF02 275 aa11.24□□□□□ -0.61
GABPB1-201ENST00000220429 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 PDCD6O75340 191 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 NGFP01138 241 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 SPACA3Q8IXA5 215 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 ABHD17AQ96GS6 310 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 B5MCH6 92 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 SS18L1O75177 396 aaPredicted RBP11.23□□□□□ -0.61
GABPB1-201ENST00000220429 HBZP02008 142 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 MGST1P10620 155 aaKnown RBP11.23□□□□□ -0.61
GABPB1-201ENST00000220429 TCL1AP56279 114 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 KLF5Q13887 457 aaPredicted RBP11.23□□□□□ -0.61
GABPB1-201ENST00000220429 SAP30LQ9HAJ7 183 aa11.23□□□□□ -0.61
GABPB1-201ENST00000220429 CD300LBA8K4G0 201 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 FAM120AOSQ5T036 256 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 C12orf49Q9H741 205 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 UFC1Q9Y3C8 167 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 LY96Q9Y6Y9 160 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 HELTA6NFD8 242 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 SAMD5Q5TGI4 173 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 C8orf86Q6ZUL3 223 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 HARBI1Q96MB7 349 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 SPRR3Q9UBC9 169 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 OR7C1O76099 320 aaPredicted RBP11.22□□□□□ -0.61
GABPB1-201ENST00000220429 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 BCL3P20749 454 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 MALLQ13021 153 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 CITED1Q99966 193 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 TMEM147Q9BVK8 224 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 CCL28Q9NRJ3 127 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 HSPB8Q9UJY1 196 aa11.22□□□□□ -0.61
GABPB1-201ENST00000220429 KBTBD11-OT1A0A1B0GTJ5 212 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 C9JCJ5 164 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 ID1P41134 155 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 TFF3Q07654 80 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 ZNF766Q5HY98 468 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 OR1L1Q8NH94 360 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 HS3ST6Q96QI5 342 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
GABPB1-201ENST00000220429 CNOT1A5YKK6 2376 aaKnown RBP11.21□□□□□ -0.61
GABPB1-201ENST00000220429 IGKV1D-13A0A0B4J2D9 117 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms