RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 IL19Q9UHD0 177 aa16.85■□□□□ 0.29
PMS1-222ENST00000639501 IGHV2OR16-5A0A0B4J2B6 119 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 NTN3O00634 580 aaPredicted RBP16.84■□□□□ 0.29
PMS1-222ENST00000639501 TIGITQ495A1 244 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 Q56UQ5 140 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 C19orf35Q6ZS72 473 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 IQCF6A8MYZ5 107 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 ISLRO14498 428 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 IGLL1P15814 213 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 USF1P22415 310 aaPredicted RBP16.84■□□□□ 0.29
PMS1-222ENST00000639501 GDF5OSQ5U4N7 250 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 TMEM251Q8N6I4 163 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 KIR3DL3Q8N743 410 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 IGF2BP2-AS1Q96M15 143 aa16.84■□□□□ 0.29
PMS1-222ENST00000639501 FAM90A9PA6NNJ1 464 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 NPY1RP25929 384 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 MORN2Q502X0 79 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 SAPCD1Q5SSQ6 148 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 TIPARPQ7Z3E1 657 aaKnown RBP16.83■□□□□ 0.28
PMS1-222ENST00000639501 GCM1Q9NP62 436 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 BET1LQ9NYM9 111 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 ITGB1BP1O14713 200 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 CDKN1BP46527 198 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 ZNF134P52741 427 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 ERVK-16P61578 105 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 FBLN7Q53RD9 439 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 WDR82Q6UXN9 313 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 SLC24A4Q8NFF2 622 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 CT55Q8WUE5 264 aa16.83■□□□□ 0.28
PMS1-222ENST00000639501 IGLC7A0M8Q6 106 aa16.82■□□□□ 0.28
PMS1-222ENST00000639501 FAM181BA6NEQ2 426 aa16.82■□□□□ 0.28
PMS1-222ENST00000639501 GABRA6Q16445 453 aa16.82■□□□□ 0.28
PMS1-222ENST00000639501 SPACA3Q8IXA5 215 aa16.82■□□□□ 0.28
PMS1-222ENST00000639501 NANOS1Q8WY41 292 aaKnown RBP16.82■□□□□ 0.28
PMS1-222ENST00000639501 NABP2Q9BQ15 211 aa16.82■□□□□ 0.28
PMS1-222ENST00000639501 GNG12Q9UBI6 72 aa16.82■□□□□ 0.28
PMS1-222ENST00000639501 IGKV1OR2-108A0A075B7D4 117 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 OR7C2O60412 319 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 SELENOVP59797 346 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 NEUROG1Q92886 237 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 LINC00479Q96M42 142 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 B4GALT7Q9UBV7 327 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 AHCTF1Q8WYP5 2266 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 TRGV8A0A0C4DH27 118 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 IGHV2-70DA0A0C4DH43 119 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 SPINT2O43291 252 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 RPL19P84098 196 aaKnown RBP16.81■□□□□ 0.28
PMS1-222ENST00000639501 COTL1Q14019 142 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 CD177Q8N6Q3 437 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 KLF14Q8TD94 323 aaPredicted RBP16.81■□□□□ 0.28
PMS1-222ENST00000639501 ST6GALNAC6Q969X2 333 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 FZR1Q9UM11 496 aa16.81■□□□□ 0.28
PMS1-222ENST00000639501 EP300Q09472 2414 aaPredicted RBP16.81■□□□□ 0.28
PMS1-222ENST00000639501 FAM90A1Q86YD7 464 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 SLC25A10Q9UBX3 287 aaPredicted RBP16.8■□□□□ 0.28
PMS1-222ENST00000639501 PRRC2CQ9Y520 2896 aaKnown RBP16.8■□□□□ 0.28
PMS1-222ENST00000639501 TRAV9-2A0A087WT02 112 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 IGHV1-69-2A0A0G2JMI3 117 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 IZUMO1RA6ND01 250 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 C15orf61A6NNL5 157 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 GPR6P46095 362 aaPredicted RBP16.8■□□□□ 0.28
PMS1-222ENST00000639501 RNF151Q2KHN1 245 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 COX19Q49B96 90 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 PRR7Q8TB68 274 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 LOXL4Q96JB6 756 aa16.8■□□□□ 0.28
PMS1-222ENST00000639501 MRPL27Q9P0M9 148 aaKnown RBP16.8■□□□□ 0.28
PMS1-222ENST00000639501 H0YJW9 148 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 RPL8P62917 257 aaKnown RBP16.79■□□□□ 0.28
PMS1-222ENST00000639501 PLGLB1Q02325 96 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 PMCHL1Q16048 86 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 LEAP2Q969E1 77 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 IFI27L2Q9H2X8 130 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 TMEM167BQ9NRX6 74 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 DSPP15924 2871 aaKnown RBP16.79■□□□□ 0.28
PMS1-222ENST00000639501 A0A1W2PN81 502 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 M0QZ24 198 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 ADH4P08319 380 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 PPOXP50336 477 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 TBR1Q16650 682 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 ETFRF1Q6IPR1 90 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 MUC15Q8N387 334 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 SSBP4Q9BWG4 385 aaPredicted RBP16.79■□□□□ 0.28
PMS1-222ENST00000639501 HINT2Q9BX68 163 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 TNCP24821 2201 aa16.79■□□□□ 0.28
PMS1-222ENST00000639501 C2orf70A6NJV1 201 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 ZNF891A8MT65 544 aaPredicted RBP16.78■□□□□ 0.28
PMS1-222ENST00000639501 M0R2Z0 102 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 HSBP1O75506 76 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 TNFSF4P23510 183 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 OR8B3Q8NGG8 313 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 OR8B2Q96RD0 313 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 S1PR3Q99500 378 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 CLEC5AQ9NY25 188 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 ARL2-SNX15V9GYD0 113 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 ZFHX4Q86UP3 3567 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 TNFSF15O95150 251 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 RAB31Q13636 194 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 MORN5Q5VZ52 161 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 OR4C5Q8NGB2 326 aa16.78■□□□□ 0.28
PMS1-222ENST00000639501 OR5B3Q8NH48 314 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms