RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TNFRSF9Q07011 255 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 PSG5Q15238 335 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 MMDQ15546 238 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 VMA21Q3ZAQ7 101 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 SPINK9Q5DT21 86 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 TMEM65Q6PI78 240 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 RNF152Q8N8N0 203 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 OR4A16Q8NH70 328 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 TMEM167AQ8TBQ9 72 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 RBKSQ9H477 322 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.9□□□□□ -0.82
PNKP-217ENST00000625216 TMEM14BQ9NUH8 114 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 FOXA2Q9Y261 457 aaPredicted RBP9.9□□□□□ -0.82
PNKP-217ENST00000625216 BOLA1Q9Y3E2 137 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 WRBO00258 174 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 SNAPC5O75971 98 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 NDUFA3O95167 84 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 SPDEFO95238 335 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 IAPPP10997 89 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 PAX9P55771 341 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 FOXE3Q13461 319 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 LGALSLQ3ZCW2 172 aaPredicted RBP9.89□□□□□ -0.83
PNKP-217ENST00000625216 ZNF546Q86UE3 836 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 LINC00482Q8N8I6 264 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 OR4A5Q8NH83 315 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 VSTM2AQ8TAG5 236 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 TSNAXQ99598 290 aaKnown RBP9.89□□□□□ -0.83
PNKP-217ENST00000625216 AIFM2Q9BRQ8 373 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 MCRIP2Q9BUT9 160 aaKnown RBP9.89□□□□□ -0.83
PNKP-217ENST00000625216 FBXL15Q9H469 300 aa9.89□□□□□ -0.83
PNKP-217ENST00000625216 NUDT19A8MXV4 375 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 E5RGE8 158 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 NBR2O15453 112 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 SYNGR2O43760 224 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 RBMXL2O75526 392 aaKnown RBP9.88□□□□□ -0.83
PNKP-217ENST00000625216 IGHG4P01861 327 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 HLA-DRB1P01911 266 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 RLN2P04090 185 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 CDX1P47902 265 aaPredicted RBP9.88□□□□□ -0.83
PNKP-217ENST00000625216 C10orf55Q5SWW7 151 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 ZNF429Q86V71 674 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
PNKP-217ENST00000625216 TEX45Q8NA69 505 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 KLHL30-AS1Q8NEE0 82 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 NPBQ8NG41 125 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 RNF5Q99942 180 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 MFFQ9GZY8 342 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 ZNF430Q9H8G1 570 aaPredicted RBP9.88□□□□□ -0.83
PNKP-217ENST00000625216 KIAA1456Q9P272 454 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 METTL1Q9UBP6 276 aaKnown RBP9.88□□□□□ -0.83
PNKP-217ENST00000625216 PRNDQ9UKY0 176 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 HSPB11Q9Y547 144 aa9.88□□□□□ -0.83
PNKP-217ENST00000625216 IGSF23A1L1A6 192 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 FAM24AA6NFZ4 105 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 L7N2F9 121 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 RRHO14718 337 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 SPCS3P61009 180 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 RPL8P62917 257 aaKnown RBP9.87□□□□□ -0.83
PNKP-217ENST00000625216 SSBP2P81877 361 aaPredicted RBP9.87□□□□□ -0.83
PNKP-217ENST00000625216 CFHR3Q02985 330 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 PJVKQ0ZLH3 352 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 C5orf64Q2M2E5 130 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 ETV3LQ6ZN32 361 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 OR52E5Q8NH55 327 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 DTD1Q8TEA8 209 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 AQP10Q96PS8 301 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 P2RX4Q99571 388 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 HSPB9Q9BQS6 159 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 ZMAT5Q9UDW3 170 aaKnown RBP9.87□□□□□ -0.83
PNKP-217ENST00000625216 OR51B2Q9Y5P1 312 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 DNAH3Q8TD57 4116 aa9.87□□□□□ -0.83
PNKP-217ENST00000625216 TEX50A0A1B0GTY4 177 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 A0A1B0GW64 132 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 CEBPZOSA8MTT3 80 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 H3BP45 60 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 CCL24O00175 119 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 MED6O75586 246 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 IFNA17P01571 189 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 PRB2P02812 416 aaPredicted RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 RPLP1P05386 114 aaKnown RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 PVALBP20472 110 aaPredicted RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 P2RY1P47900 373 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 AP2S1P53680 142 aaPredicted RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 VAMP2P63027 116 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 ZNF345Q14585 488 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 PRSS8Q16651 343 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 ACOT7LQ6ZUV0 252 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 KCNRGQ8N5I3 272 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 MRAPQ8TCY5 172 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 DPF1Q92782 380 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 BSCL2Q96G97 398 aaPredicted RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 OR4C12Q96R67 309 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 RAB40CQ96S21 281 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 LYRM2Q9NU23 88 aaPredicted RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 AURKAIP1Q9NWT8 199 aaPredicted RBP9.86□□□□□ -0.83
PNKP-217ENST00000625216 ZNF257Q9Y2Q1 563 aa9.86□□□□□ -0.83
PNKP-217ENST00000625216 E7EUB6 86 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms