RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 C11orf53Q8IXP5 236 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 OR4C5Q8NGB2 326 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 OBP2BQ9NPH6 170 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 B4GALT7Q9UBV7 327 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 IQCF6A8MYZ5 107 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 IGLL1P15814 213 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 NPY1RP25929 384 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 Q56UQ5 140 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 FAM214BQ7L5A3 538 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 MUC15Q8N387 334 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 SLC24A4Q8NFF2 622 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 IGF2BP2-AS1Q96M15 143 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
LDB3-209ENST00000623056 TECRQ9NZ01 308 aaKnown RBP11.61□□□□□ -0.55
LDB3-209ENST00000623056 PCSK5Q92824 1860 aa11.61□□□□□ -0.55
LDB3-209ENST00000623056 H0YJW9 148 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 J3QW42 95 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 HSBP1O75506 76 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 ADH4P08319 380 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 TBR1Q16650 682 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 RPL39P5Q59GN2 51 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 OR8B3Q8NGG8 313 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 PRR7Q8TB68 274 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 FAM216AQ8WUB2 273 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 OR8B2Q96RD0 313 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 GCM1Q9NP62 436 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 M0R2Z0 102 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 TNFSF15O95150 251 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 PPOXP50336 477 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 RNF151Q2KHN1 245 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 ASPHD1Q5U4P2 390 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 SPACA3Q8IXA5 215 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 FAM168AQ92567 244 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 NABP2Q9BQ15 211 aa11.6□□□□□ -0.55
LDB3-209ENST00000623056 OR7C2O60412 319 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 MPV17P39210 176 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 MRPL49Q13405 166 aaKnown RBP11.59□□□□□ -0.55
LDB3-209ENST00000623056 NHLRC2Q8NBF2 726 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 LOXL4Q96JB6 756 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 GNG12Q9UBI6 72 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 NCOR1O75376 2440 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 BDP1A6H8Y1 2624 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 C15orf61A6NNL5 157 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 NTN3O00634 580 aaPredicted RBP11.59□□□□□ -0.55
LDB3-209ENST00000623056 UBE2G1P62253 170 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 EDDM3AQ14507 147 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 TMEM105Q8N8V8 129 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 WIPF2Q8TF74 440 aaPredicted RBP11.59□□□□□ -0.55
LDB3-209ENST00000623056 NEUROG1Q92886 237 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 S1PR3Q99500 378 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
LDB3-209ENST00000623056 TTTY12Q9BZ98 90 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 PLEKHA3Q9HB20 300 aa11.59□□□□□ -0.55
LDB3-209ENST00000623056 ARG2P78540 354 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 GDF5OSQ5U4N7 250 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 ETFRF1Q6IPR1 90 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 FAM122AQ96E09 287 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 COMMD5Q9GZQ3 224 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 TRAV30A0A087WSZ9 112 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 C2orf70A6NJV1 201 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 IGHV3-13P01766 116 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 IGHV3-7P01780 117 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 VAMP3Q15836 100 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
LDB3-209ENST00000623056 WDR82Q6UXN9 313 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 FAM90A1Q86YD7 464 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 TMEM251Q8N6I4 163 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 CORO2AQ92828 525 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 GSX1Q9H4S2 264 aaPredicted RBP11.58□□□□□ -0.56
LDB3-209ENST00000623056 TNFRSF19Q9NS68 423 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 CELSR3Q9NYQ7 3312 aa11.58□□□□□ -0.56
LDB3-209ENST00000623056 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
LDB3-209ENST00000623056 TRAT1Q6PIZ9 186 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 RASL11AQ6T310 242 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 KLF14Q8TD94 323 aaPredicted RBP11.57□□□□□ -0.56
LDB3-209ENST00000623056 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 TP73-AS1Q9UF72 201 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 M0QZ24 198 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
LDB3-209ENST00000623056 ZNF134P52741 427 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 MFAP2P55001 183 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 HSPE1P61604 102 aaKnown RBP11.57□□□□□ -0.56
LDB3-209ENST00000623056 RPL8P62917 257 aaKnown RBP11.57□□□□□ -0.56
LDB3-209ENST00000623056 TIPARPQ7Z3E1 657 aaKnown RBP11.57□□□□□ -0.56
LDB3-209ENST00000623056 ERASQ7Z444 233 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 MOB3BQ86TA1 216 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
LDB3-209ENST00000623056 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.56□□□□□ -0.56
LDB3-209ENST00000623056 A0A1W2PN81 502 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 A0A1W2PRE2 83 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 MYOD1P15172 320 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 SSPNQ14714 243 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 SMIM21Q3B7S5 101 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 CD177Q8N6Q3 437 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 CT55Q8WUE5 264 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 CXXC4Q9H2H0 198 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 IFI27L2Q9H2X8 130 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms