RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RNASEH2CQ8TDP1 164 aaKnown RBP12.03□□□□□ -0.48
CDH1-213ENST00000612417 PACRGQ96M98 296 aaPredicted RBP12.03□□□□□ -0.48
CDH1-213ENST00000612417 GCM1Q9NP62 436 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 NPY1RP25929 384 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 NUTF2P61970 127 aaKnown RBP12.02□□□□□ -0.48
CDH1-213ENST00000612417 CCL8P80075 99 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 CST9LP1Q5W188 147 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 MIC13Q5XKP0 118 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 TCF23Q7RTU1 214 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 ZCCHC24Q8N2G6 241 aaKnown RBP12.02□□□□□ -0.48
CDH1-213ENST00000612417 SLC24A4Q8NFF2 622 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 OR1P1Q8NH06 330 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 BTF3L4Q96K17 158 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 CHODLQ9H9P2 273 aa12.02□□□□□ -0.48
CDH1-213ENST00000612417 CACNA1BQ00975 2339 aa12.02□□□□□ -0.49
CDH1-213ENST00000612417 E7EQL1 145 aa12.02□□□□□ -0.49
CDH1-213ENST00000612417 NDUFB4O95168 129 aa12.02□□□□□ -0.49
CDH1-213ENST00000612417 UBE2G2P60604 165 aa12.02□□□□□ -0.49
CDH1-213ENST00000612417 ARSJQ5FYB0 599 aaPredicted RBP12.02□□□□□ -0.49
CDH1-213ENST00000612417 LEAP2Q969E1 77 aa12.02□□□□□ -0.49
CDH1-213ENST00000612417 GAFA1Q96PS6 74 aa12.02□□□□□ -0.49
CDH1-213ENST00000612417 C17orf100A8MU93 164 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
CDH1-213ENST00000612417 IRF2P14316 349 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 MRPS11P82912 194 aaKnown RBP12.01□□□□□ -0.49
CDH1-213ENST00000612417 FAM201AQ5SY85 155 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 TEPPQ6URK8 271 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 TMEM144Q7Z5S9 345 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 CORO2AQ92828 525 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 IDI2-AS1Q9NZ38 188 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 ABCA4P78363 2273 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 RPL29P47914 159 aaKnown RBP12.01□□□□□ -0.49
CDH1-213ENST00000612417 PKIAP61925 76 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 ZNF788Q6ZQV5 615 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 OR5R1Q8NH85 324 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 TMEM204Q9BSN7 226 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 DERL1Q9BUN8 251 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 DYNLRB1Q9NP97 96 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 ZNF257Q9Y2Q1 563 aa12.01□□□□□ -0.49
CDH1-213ENST00000612417 DVL1O14640 695 aa12□□□□□ -0.49
CDH1-213ENST00000612417 PLAUP00749 431 aa12□□□□□ -0.49
CDH1-213ENST00000612417 TNFRSF1AP19438 455 aa12□□□□□ -0.49
CDH1-213ENST00000612417 GNLYP22749 145 aa12□□□□□ -0.49
CDH1-213ENST00000612417 UQCRFS1P47985 274 aa12□□□□□ -0.49
CDH1-213ENST00000612417 FOXL1Q12952 345 aa12□□□□□ -0.49
CDH1-213ENST00000612417 EFNB3Q15768 340 aa12□□□□□ -0.49
CDH1-213ENST00000612417 DUX4L9Q6RFH8 374 aaPredicted RBP12□□□□□ -0.49
CDH1-213ENST00000612417 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 AMBPP02760 352 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 DDTP30046 118 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 APOBEC3AP31941 199 aaPredicted RBP11.99□□□□□ -0.49
CDH1-213ENST00000612417 CHRNA7P36544 502 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 GNG10P50151 68 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 RHOBP62745 196 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 RAB31Q13636 194 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 TEX36Q5VZQ5 186 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 SLC25A48Q6ZT89 311 aaKnown RBP11.99□□□□□ -0.49
CDH1-213ENST00000612417 LYG1Q8N1E2 194 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 DEFB108BQ8NET1 73 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 ENY2Q9NPA8 101 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 PRNDQ9UKY0 176 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 TNCP24821 2201 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 YLPM1P49750 1951 aaKnown RBP11.99□□□□□ -0.49
CDH1-213ENST00000612417 ARFGEF3Q5TH69 2177 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 TSTD3H0UI37 97 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 CA2P00918 260 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 IL3RAP26951 378 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 GCHFRP30047 84 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 PRR20EP86478 221 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 PRR20CP86479 221 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 PRR20DP86480 221 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 PRR20BP86481 221 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 PRR20AP86496 221 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 SSMEM1Q8WWF3 244 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 SFRP2Q96HF1 295 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 RPUSD1Q9UJJ7 312 aaKnown RBP11.99□□□□□ -0.49
CDH1-213ENST00000612417 ARL2-SNX15V9GYD0 113 aa11.99□□□□□ -0.49
CDH1-213ENST00000612417 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 ATP5IP56385 69 aaPredicted RBP11.98□□□□□ -0.49
CDH1-213ENST00000612417 GAMTQ14353 236 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
CDH1-213ENST00000612417 CYB5R2Q6BCY4 276 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 ZNF114Q8NC26 417 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 C11orf52Q96A22 123 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 SAP30LQ9HAJ7 183 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 FUT9Q9Y231 359 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 OR51B2Q9Y5P1 312 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 MT-CO2P00403 227 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 LINC00614P0C842 121 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 RPL15P61313 204 aaKnown RBP11.98□□□□□ -0.49
CDH1-213ENST00000612417 PRCDQ00LT1 54 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 CLEC12BQ2HXU8 276 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 FAM78BQ5VT40 261 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 OR5T1Q8NG75 326 aa11.98□□□□□ -0.49
CDH1-213ENST00000612417 SEPSECSQ9HD40 501 aaKnown RBP11.98□□□□□ -0.49
CDH1-213ENST00000612417 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
CDH1-213ENST00000612417 LRBAP50851 2863 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms