RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 IGKV1OR2-108A0A075B7D4 117 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 TRAV34A0A0B4J273 112 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 HELTA6NFD8 242 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 J3QW42 95 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 DLX1P56177 255 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 KLF3P57682 345 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-207ENST00000612273 HSPE1P61604 102 aaKnown RBP11.53□□□□□ -0.56
COL6A1-207ENST00000612273 FAM27E3Q08E93 113 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 FAM90A1Q86YD7 464 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 ATOH7Q8N100 152 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 FAM19A2Q8N3H0 131 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 ZNF71Q9NQZ8 489 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-207ENST00000612273 H3BTX0 84 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 MORN5Q5VZ52 161 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 OR2T6Q8NHC8 308 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 EAF1Q96JC9 268 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-207ENST00000612273 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-207ENST00000612273 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 PPIAL4AQ9Y536 164 aa11.53□□□□□ -0.56
COL6A1-207ENST00000612273 A8MXE2 369 aa11.52□□□□□ -0.56
COL6A1-207ENST00000612273 MKRN2OSH3BPM6 223 aa11.52□□□□□ -0.56
COL6A1-207ENST00000612273 TNFSF13O75888 250 aa11.52□□□□□ -0.56
COL6A1-207ENST00000612273 TYMSP04818 313 aa11.52□□□□□ -0.56
COL6A1-207ENST00000612273 SVEP1Q4LDE5 3571 aa11.52□□□□□ -0.56
COL6A1-207ENST00000612273 C15orf61A6NNL5 157 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 PRR33A8MZF0 331 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 REG1AP05451 166 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 CHRNB4P30926 498 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 CCKARP32238 428 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 IDI2-AS1Q9NZ38 188 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 DKK4Q9UBT3 224 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 RNF114Q9Y508 228 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 TRGV10A0A0A0MS01 117 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 M0R296 226 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 YPEL1O60688 119 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 CCL3L1P16619 93 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 ZNF25P17030 456 aaPredicted RBP11.52□□□□□ -0.57
COL6A1-207ENST00000612273 PDLIM4P50479 330 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 LRBAP50851 2863 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 FOXL1Q12952 345 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 BTF3L4Q96K17 158 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 YPEL2Q96QA6 119 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 SLC35D1Q9NTN3 355 aa11.52□□□□□ -0.57
COL6A1-207ENST00000612273 IGHV3-72A0A0B4J1Y9 119 aa11.51□□□□□ -0.57
COL6A1-207ENST00000612273 ZNF883P0CG24 379 aa11.51□□□□□ -0.57
COL6A1-207ENST00000612273 H1FXQ92522 213 aaKnown RBP11.51□□□□□ -0.57
COL6A1-207ENST00000612273 PRSS46E5RG02 174 aa11.51□□□□□ -0.57
COL6A1-207ENST00000612273 MPDU1O75352 247 aa11.51□□□□□ -0.57
COL6A1-207ENST00000612273 LGALS4P56470 323 aa11.51□□□□□ -0.57
COL6A1-207ENST00000612273 DIRC2Q96SL1 478 aa11.51□□□□□ -0.57
COL6A1-207ENST00000612273 ASH1LQ9NR48 2969 aaKnown RBP11.51□□□□□ -0.57
COL6A1-207ENST00000612273 TOX4O94842 621 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 PYYP10082 97 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 TFPI2P48307 235 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 AMTP48728 403 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 SSBP2P81877 361 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-207ENST00000612273 TNFAIP6P98066 277 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-207ENST00000612273 RPEL1Q2QD12 228 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 ZNF474Q6S9Z5 364 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-207ENST00000612273 TCTEX1D1Q8N7M0 179 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 ZCCHC14Q8WYQ9 949 aaKnown RBP11.5□□□□□ -0.57
COL6A1-207ENST00000612273 TMEM106BQ9NUM4 274 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 IL36BQ9NZH7 164 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 TRAV17A0A0B4J275 112 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 LINC00310P59036 64 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 SSTP61278 116 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 DIAPH2-AS1Q14236 149 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 SEM1Q6ZVN7 128 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 RAB1CQ92928 201 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 C2orf88Q9BSF0 95 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
COL6A1-207ENST00000612273 TPPP2P59282 170 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 OR5AU1Q8NGC0 362 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 RCHY1Q96PM5 261 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 GNB4Q9HAV0 340 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 SLC25A15Q9Y619 301 aa11.5□□□□□ -0.57
COL6A1-207ENST00000612273 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 E7EUB6 86 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 ZNF253O75346 499 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 MT-CO2P00403 227 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 TIGITQ495A1 244 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 FAM168AQ92567 244 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 WNT10AQ9GZT5 417 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 TIMM8BQ9Y5J9 83 aaPredicted RBP11.49□□□□□ -0.57
COL6A1-207ENST00000612273 MALRD1Q5VYJ5 2156 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 M0R143 59 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
COL6A1-207ENST00000612273 OR5G3P0C626 314 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 SRIP30626 198 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 CAMPP49913 170 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 NUTF2P61970 127 aaKnown RBP11.48□□□□□ -0.57
COL6A1-207ENST00000612273 BLNKQ8WV28 456 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 IGHG3P01860 377 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 LINC00869P0C866 280 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
COL6A1-207ENST00000612273 IRF2P14316 349 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 PLSCR4Q9NRQ2 329 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms