RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SSBP4Q9BWG4 385 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-216ENST00000610401 IFI27L2Q9H2X8 130 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 DSCAMO60469 2012 aa16.78■□□□□ 0.28
SSBP3-216ENST00000610401 TMEM210A6NLX4 147 aa16.77■□□□□ 0.28
SSBP3-216ENST00000610401 WDR31Q8NA23 367 aa16.77■□□□□ 0.28
SSBP3-216ENST00000610401 NABP2Q9BQ15 211 aa16.77■□□□□ 0.28
SSBP3-216ENST00000610401 ABCA4P78363 2273 aa16.77■□□□□ 0.28
SSBP3-216ENST00000610401 KIR2DL2P43627 348 aaPredicted RBP16.77■□□□□ 0.28
SSBP3-216ENST00000610401 Q6ZT83 130 aa16.77■□□□□ 0.28
SSBP3-216ENST00000610401 FDCSPQ8NFU4 85 aa16.77■□□□□ 0.28
SSBP3-216ENST00000610401 CALYQ9NYX4 217 aa16.77■□□□□ 0.28
SSBP3-216ENST00000610401 TNRC6BQ9UPQ9 1833 aaKnown RBP16.77■□□□□ 0.27
SSBP3-216ENST00000610401 IGKV1OR2-108A0A075B7D4 117 aa16.77■□□□□ 0.27
SSBP3-216ENST00000610401 RPLP1P05386 114 aaKnown RBP16.77■□□□□ 0.27
SSBP3-216ENST00000610401 LBHQ53QV2 105 aaPredicted RBP16.77■□□□□ 0.27
SSBP3-216ENST00000610401 GCSAMQ8N6F7 178 aa16.77■□□□□ 0.27
SSBP3-216ENST00000610401 ITLN1Q8WWA0 313 aa16.77■□□□□ 0.27
SSBP3-216ENST00000610401 CCL13Q99616 98 aa16.77■□□□□ 0.27
SSBP3-216ENST00000610401 J3QR06 171 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 RAB4AP20338 218 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 OR2T6Q8NHC8 308 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 FER1L6-AS2Q96M78 137 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 TXN2Q99757 166 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 OR51B2Q9Y5P1 312 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 PYYP10082 97 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 RAB31Q13636 194 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 RPRMLQ8N4K4 120 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 GOLT1BQ9Y3E0 138 aa16.76■□□□□ 0.27
SSBP3-216ENST00000610401 ADH4P08319 380 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 LGALS4P56470 323 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 MRPS11P82912 194 aaKnown RBP16.75■□□□□ 0.27
SSBP3-216ENST00000610401 TMEM183BQ1AE95 376 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 FAM216BQ8N7L0 139 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 SPRY4Q9C004 299 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 CLCF1Q9UBD9 225 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 IGHV2OR16-5A0A0B4J2B6 119 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 IGHV1-18A0A0C4DH31 117 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 H0Y8G0 127 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 INO80CQ6PI98 192 aaPredicted RBP16.75■□□□□ 0.27
SSBP3-216ENST00000610401 ZNF355PQ9NSJ1 428 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 REG1AP05451 166 aa16.75■□□□□ 0.27
SSBP3-216ENST00000610401 SSBP2P81877 361 aaPredicted RBP16.75■□□□□ 0.27
SSBP3-216ENST00000610401 KIR2DL5BA0A0G2JN68 375 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 KIR2DL5BA0A0G2JPC4 375 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 A0A1W2PN81 502 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 SRRM4A7MD48 611 aaKnown RBP16.74■□□□□ 0.27
SSBP3-216ENST00000610401 TIGITQ495A1 244 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 C10orf55Q5SWW7 151 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 KIR2DL5AQ8N109 375 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 NRN1Q9NPD7 142 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 GGTLC3B5MD39 225 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 TCF21O43680 179 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 TDGF1P13385 188 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 PMCHL1Q16048 86 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 SPATA45Q537H7 98 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 V9GYV3 84 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 WNK2Q9Y3S1 2297 aa16.74■□□□□ 0.27
SSBP3-216ENST00000610401 M0QZ24 198 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 LOXL3P58215 753 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 UBALD2Q8IYN6 164 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 TMEM178AQ8NBL3 297 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 ST6GALNAC6Q969X2 333 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 ZPBPQ9BS86 351 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 WT1P19544 449 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-216ENST00000610401 OR4S2Q8NH73 311 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 BLNKQ8WV28 456 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 STARD4Q96DR4 205 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 ANKRD11Q6UB99 2663 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-216ENST00000610401 AKAP13Q12802 2813 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 CD99P14209 185 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 DLX1P56177 255 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 C19orf35Q6ZS72 473 aa16.73■□□□□ 0.27
SSBP3-216ENST00000610401 YPEL3P61236 119 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-216ENST00000610401 TRAT1Q6PIZ9 186 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 Q6ZN92 141 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 TMEM68Q96MH6 324 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 MIEN1Q9BRT3 115 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 LPAR2Q9HBW0 351 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 ZNF586Q9NXT0 402 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 PRSS46E5RG02 174 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 CHRNB4P30926 498 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 HINT1P49773 126 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-216ENST00000610401 HSPE1P61604 102 aaKnown RBP16.72■□□□□ 0.27
SSBP3-216ENST00000610401 IBA57Q5T440 356 aaKnown RBP16.72■□□□□ 0.27
SSBP3-216ENST00000610401 RAB1CQ92928 201 aa16.72■□□□□ 0.27
SSBP3-216ENST00000610401 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-216ENST00000610401 C15orf61A6NNL5 157 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 C21orf140B9A014 251 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 MT-CO2P00403 227 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 GNG5P63218 68 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 MCRIP2Q9BUT9 160 aaKnown RBP16.71■□□□□ 0.27
SSBP3-216ENST00000610401 IDI2-AS1Q9NZ38 188 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 APC2O95996 2303 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 MPDU1O75352 247 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 RANP62826 216 aaKnown RBP16.71■□□□□ 0.27
SSBP3-216ENST00000610401 CCL8P80075 99 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 Q56UQ5 140 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 ASCL2Q99929 193 aa16.71■□□□□ 0.27
SSBP3-216ENST00000610401 TNFSF13O75888 250 aa16.71■□□□□ 0.26
SSBP3-216ENST00000610401 IGKV3-15P01624 115 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms