RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TMEM127O75204 238 aa15.58■□□□□ 0.08
PNKP-212ENST00000599454 MXD1Q05195 221 aa15.58■□□□□ 0.08
PNKP-212ENST00000599454 IDNKQ5T6J7 187 aa15.58■□□□□ 0.08
PNKP-212ENST00000599454 RARRES2Q99969 163 aa15.58■□□□□ 0.08
PNKP-212ENST00000599454 C11orf68Q9H3H3 251 aaKnown RBP15.58■□□□□ 0.08
PNKP-212ENST00000599454 PRNDQ9UKY0 176 aa15.58■□□□□ 0.08
PNKP-212ENST00000599454 IGHV3OR16-8A0A075B7F1 116 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 IGHV7-4-1A0A0J9YVY3 117 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 CHEK1O14757 476 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 NUPL2O15504 423 aaKnown RBP15.57■□□□□ 0.08
PNKP-212ENST00000599454 RLN1P04808 185 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 CTSGP08311 255 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 DHRS11Q6UWP2 260 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 APRG1Q8IVJ8 170 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 TMEM116Q8NCL8 245 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 OR1P1Q8NH06 330 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 MOB3AQ96BX8 217 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 OR10C1Q96KK4 312 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 CMTM3Q96MX0 182 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 RNF2Q99496 336 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 RHPN1-AS1Q9BWJ2 59 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 IFT46Q9NQC8 304 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 EHFQ9NZC4 300 aa15.57■□□□□ 0.08
PNKP-212ENST00000599454 PGLYRP1O75594 196 aaPredicted RBP15.56■□□□□ 0.08
PNKP-212ENST00000599454 DEDDO75618 318 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 KRASP01116 189 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 FCER2P06734 321 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 CLEC2LP0C7M8 214 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 LPAR6P43657 344 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 CMTM1Q8IZ96 169 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 TSPAN14Q8NG11 270 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 C11orf45Q8TAV5 145 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 FCAMRQ8WWV6 532 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 DGCR14Q96DF8 476 aaKnown RBP15.56■□□□□ 0.08
PNKP-212ENST00000599454 TSC22D3Q99576 134 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 TXN2Q99757 166 aa15.56■□□□□ 0.08
PNKP-212ENST00000599454 IFNA4P05014 189 aa15.55■□□□□ 0.08
PNKP-212ENST00000599454 CD5P06127 495 aa15.55■□□□□ 0.08
PNKP-212ENST00000599454 TCTAP57738 103 aa15.55■□□□□ 0.08
PNKP-212ENST00000599454 NSG2Q9Y328 171 aa15.55■□□□□ 0.08
PNKP-212ENST00000599454 XRCC3O43542 346 aa15.54■□□□□ 0.08
PNKP-212ENST00000599454 G6PCP35575 357 aa15.54■□□□□ 0.08
PNKP-212ENST00000599454 MFAP4P55083 255 aa15.54■□□□□ 0.08
PNKP-212ENST00000599454 RBMS2Q15434 407 aaKnown RBP15.54■□□□□ 0.08
PNKP-212ENST00000599454 ZNF2Q9BSG1 426 aaPredicted RBP15.54■□□□□ 0.08
PNKP-212ENST00000599454 YTHDF1Q9BYJ9 559 aaKnown RBP15.54■□□□□ 0.08
PNKP-212ENST00000599454 TMEM14BQ9NUH8 114 aa15.54■□□□□ 0.08
PNKP-212ENST00000599454 DNAH10Q8IVF4 4471 aa15.54■□□□□ 0.08
PNKP-212ENST00000599454 TRAV14DV4A0A0A6YYC5 116 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 MEIS3P1A6NDR6 274 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 C15orf61A6NNL5 157 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 GPR31O00270 319 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 YIF1AO95070 293 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 PAFAH1B2P68402 229 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 OR11H2Q8NH07 326 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 ZNF414Q96IQ9 312 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 NXF2Q9GZY0 626 aaKnown RBP15.53■□□□□ 0.08
PNKP-212ENST00000599454 FAM212BQ9NTI7 297 aaPredicted RBP15.53■□□□□ 0.08
PNKP-212ENST00000599454 ANAPC10Q9UM13 185 aa15.53■□□□□ 0.08
PNKP-212ENST00000599454 LOC100506127A0A0U1RQW1 187 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 TFPI2P48307 235 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 RFX2P48378 723 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 TAS2R46P59540 309 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 NANOS2P60321 138 aaKnown RBP15.52■□□□□ 0.08
PNKP-212ENST00000599454 ZNF124Q15973 351 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 FAM90A2PQ658T7 463 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 SLC25A46Q96AG3 418 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 S100A16Q96FQ6 103 aaKnown RBP15.52■□□□□ 0.08
PNKP-212ENST00000599454 GINS3Q9BRX5 216 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 RNF167Q9H6Y7 350 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 FBXL17Q9UF56 701 aa15.52■□□□□ 0.08
PNKP-212ENST00000599454 I3L2K1 104 aa15.51■□□□□ 0.07
PNKP-212ENST00000599454 ZNF114Q8NC26 417 aa15.51■□□□□ 0.07
PNKP-212ENST00000599454 OR5H2Q8NGV7 314 aa15.51■□□□□ 0.07
PNKP-212ENST00000599454 C2CD4CQ8TF44 421 aa15.51■□□□□ 0.07
PNKP-212ENST00000599454 MISP3Q96FF7 219 aa15.51■□□□□ 0.07
PNKP-212ENST00000599454 AGRNO00468 2067 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 IGKV3-7A0A075B6H7 116 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 IGHV3-49A0A0A0MS15 119 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 EIF4EP06730 217 aaKnown RBP15.5■□□□□ 0.07
PNKP-212ENST00000599454 NAT1P18440 290 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 S100GP29377 79 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 CROCCP3Q8IVE0 287 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 OR6F1Q8NGZ6 308 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 FXYD6Q9H0Q3 95 aa15.5■□□□□ 0.07
PNKP-212ENST00000599454 DBX1A6NMT0 343 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 GNG7O60262 68 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 DFFBO76075 338 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 PMP2P02689 132 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 TMEM187Q14656 261 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 TCF24Q7RTU0 167 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 GBGT1Q8N5D6 347 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 Q9H521 79 aa15.49■□□□□ 0.07
PNKP-212ENST00000599454 HERC2O95714 4834 aa15.48■□□□□ 0.07
PNKP-212ENST00000599454 TRAV2A0A0B4J234 112 aa15.48■□□□□ 0.07
PNKP-212ENST00000599454 MT-CO2P00403 227 aa15.48■□□□□ 0.07
PNKP-212ENST00000599454 CA1P00915 261 aaPredicted RBP15.48■□□□□ 0.07
PNKP-212ENST00000599454 PRCDQ00LT1 54 aa15.48■□□□□ 0.07
PNKP-212ENST00000599454 UBE2NLQ5JXB2 153 aa15.48■□□□□ 0.07
PNKP-212ENST00000599454 LPCAT3Q6P1A2 487 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms