RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 IGHV3OR16-8A0A075B7F1 116 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 FAM240BA0A1B0GVZ2 78 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 CENPXA8MT69 81 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 C3orf84H3BNL1 204 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 ATP6V1G1O75348 118 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 DHFRP00374 187 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 FGF2P09038 288 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 HIST1H1BP16401 226 aaKnown RBP8.01□□□□□ -1.13
VRK3-214ENST00000598553 PRSS3P35030 304 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 TAS2R46P59540 309 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 CD81P60033 236 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 TM4SF20Q53R12 229 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 GTSCR1Q86UQ5 136 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 DMBX1Q8NFW5 382 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 ZNF502Q8TBZ5 544 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 CD300LFQ8TDQ1 290 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 PLEKHA2Q9HB19 425 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 COMMD9Q9P000 198 aa8.01□□□□□ -1.13
VRK3-214ENST00000598553 MARCH11A6NNE9 402 aa8□□□□□ -1.13
VRK3-214ENST00000598553 LGALS9O00182 355 aa8□□□□□ -1.13
VRK3-214ENST00000598553 PLA2G10O15496 165 aa8□□□□□ -1.13
VRK3-214ENST00000598553 LYRM1O43325 122 aa8□□□□□ -1.13
VRK3-214ENST00000598553 GGCTO75223 188 aaKnown RBP8□□□□□ -1.13
VRK3-214ENST00000598553 KRASP01116 189 aa8□□□□□ -1.13
VRK3-214ENST00000598553 PI3P19957 117 aa8□□□□□ -1.13
VRK3-214ENST00000598553 CBLN1P23435 193 aa8□□□□□ -1.13
VRK3-214ENST00000598553 F2RP25116 425 aa8□□□□□ -1.13
VRK3-214ENST00000598553 CD300CQ08708 224 aa8□□□□□ -1.13
VRK3-214ENST00000598553 ZFP69Q49AA0 526 aa8□□□□□ -1.13
VRK3-214ENST00000598553 BTNL8Q6UX41 500 aa8□□□□□ -1.13
VRK3-214ENST00000598553 OR4D10Q8NGI6 311 aa8□□□□□ -1.13
VRK3-214ENST00000598553 OR6F1Q8NGZ6 308 aa8□□□□□ -1.13
VRK3-214ENST00000598553 DYNLRB2Q8TF09 96 aa8□□□□□ -1.13
VRK3-214ENST00000598553 C15orf40Q8WUR7 153 aa8□□□□□ -1.13
VRK3-214ENST00000598553 EEF1AKMT3Q96AZ1 226 aa8□□□□□ -1.13
VRK3-214ENST00000598553 ZNF486Q96H40 463 aaPredicted RBP8□□□□□ -1.13
VRK3-214ENST00000598553 CITED4Q96RK1 184 aa8□□□□□ -1.13
VRK3-214ENST00000598553 C7orf50Q9BRJ6 194 aaKnown RBP8□□□□□ -1.13
VRK3-214ENST00000598553 SRSF8Q9BRL6 282 aaKnown RBP8□□□□□ -1.13
VRK3-214ENST00000598553 LINC00854A0A1B0GVQ3 168 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 A8MWP6 167 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 K7EIM0 57 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 GPR31O00270 319 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 CTDSPLO15194 276 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 TPPPO94811 219 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 SCAF4O95104 1147 aaKnown RBP7.99□□□□□ -1.13
VRK3-214ENST00000598553 CLEC3BP05452 202 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 OR13C7P0DN81 318 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 DEFA4P12838 97 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 ADMP35318 185 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 GUCA2BQ16661 112 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 SPINK9Q5DT21 86 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 ZNF57Q68EA5 555 aaPredicted RBP7.99□□□□□ -1.13
VRK3-214ENST00000598553 TBC1D26Q86UD7 250 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 GPHB5Q86YW7 130 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 UXS1Q8NBZ7 420 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 OR52I2Q8NH67 350 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 MRGPRFQ96AM1 343 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 ABHD1Q96SE0 405 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 MARVELD1Q9BSK0 173 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 CHRDL1Q9BU40 450 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 HINT2Q9BX68 163 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 QTRT1Q9BXR0 403 aaKnown RBP7.99□□□□□ -1.13
VRK3-214ENST00000598553 COMMD5Q9GZQ3 224 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 HIPK2Q9H2X6 1198 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 NDUFA4L2Q9NRX3 87 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 COPZ2Q9P299 210 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 KLK11Q9UBX7 282 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 CSMD3Q7Z407 3707 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 TENM2Q9NT68 2774 aa7.99□□□□□ -1.13
VRK3-214ENST00000598553 TRBV7-1A0A0A6YYK4 115 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 ZNF320A2RRD8 509 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 OR2T8A6NH00 312 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 RGS13O14921 159 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 IGHV3-48P01763 117 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 SERPINE2P07093 398 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 ERVK-16P61578 105 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 THOC7Q6I9Y2 204 aaKnown RBP7.98□□□□□ -1.13
VRK3-214ENST00000598553 FAAP20Q6NZ36 180 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 CMTM1Q8IZ96 169 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 TCTE3Q8IZS6 198 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 SEC22AQ96IW7 307 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 CXorf58Q96LI9 332 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 SRD5A3Q9H8P0 318 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 SCPEP1Q9HB40 452 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 TECRQ9NZ01 308 aaKnown RBP7.98□□□□□ -1.13
VRK3-214ENST00000598553 OR51B2Q9Y5P1 312 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 STARD9Q9P2P6 4700 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
VRK3-214ENST00000598553 LYSTQ99698 3801 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 A0A0G2JRQ6 117 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 C15orf61A6NNL5 157 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 TGOLN2O43493 480 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 ZNF207O43670 478 aaKnown RBP7.97□□□□□ -1.13
VRK3-214ENST00000598553 GSTZ1O43708 216 aaPredicted RBP7.97□□□□□ -1.13
VRK3-214ENST00000598553 RCVRNP35243 200 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 SLC25A24Q6NUK1 477 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 LHFPL1Q86WI0 220 aa7.97□□□□□ -1.13
VRK3-214ENST00000598553 OR1L8Q8NGR8 309 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms