RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 FAM223AQ8IWN6 122 aa11.8□□□□□ -0.52
USE1-206ENST00000595101 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
USE1-206ENST00000595101 MFSD2BA6NFX1 497 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 HLA-AP01891 365 aaKnown RBP11.79□□□□□ -0.52
USE1-206ENST00000595101 BTCP35070 178 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 TMEM268Q5VZI3 342 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 OR5B3Q8NH48 314 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 RANGRFQ9HD47 186 aaPredicted RBP11.79□□□□□ -0.52
USE1-206ENST00000595101 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
USE1-206ENST00000595101 FLVCR2Q9UPI3 526 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 IGHV3-21A0A0B4J1V1 117 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 SEC14L6B5MCN3 397 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 PPP5D1E7EU14 171 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 OVOL1O14753 267 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 KLK9Q2XQG4 91 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 RBPMSQ93062 196 aaKnown RBP11.79□□□□□ -0.52
USE1-206ENST00000595101 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
USE1-206ENST00000595101 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 KLK9Q9UKQ9 250 aa11.79□□□□□ -0.52
USE1-206ENST00000595101 BMPR1BO00238 502 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 PLA2G10O15496 165 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 ST8SIA3O43173 380 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
USE1-206ENST00000595101 INPP1P49441 399 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 HSPE1P61604 102 aaKnown RBP11.78□□□□□ -0.52
USE1-206ENST00000595101 ZNF600Q6ZNG1 722 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
USE1-206ENST00000595101 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 AURKAIP1Q9NWT8 199 aaPredicted RBP11.78□□□□□ -0.52
USE1-206ENST00000595101 FKBP11Q9NYL4 201 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
USE1-206ENST00000595101 SLC35G3Q8N808 338 aa11.77□□□□□ -0.52
USE1-206ENST00000595101 RRNAD1Q96FB5 475 aaKnown RBP11.77□□□□□ -0.52
USE1-206ENST00000595101 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.52
USE1-206ENST00000595101 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
USE1-206ENST00000595101 LOC105371267A0A1B0GV96 52 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 MECP2P51608 486 aaKnown RBP11.77□□□□□ -0.53
USE1-206ENST00000595101 SYNJ2BPP57105 145 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 PRCDQ00LT1 54 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 DHODHQ02127 395 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 EGFEM1PQ0D2K5 195 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
USE1-206ENST00000595101 C11orf87Q6NUJ2 197 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 SLC25A24Q6NUK1 477 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 CLEC19AQ6UXS0 136 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 LYZL2Q7Z4W2 148 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 HAPLN4Q86UW8 402 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 ZNF429Q86V71 674 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.53
USE1-206ENST00000595101 DEDD2Q8WXF8 326 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 SLC25A21Q9BQT8 299 aaPredicted RBP11.77□□□□□ -0.53
USE1-206ENST00000595101 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
USE1-206ENST00000595101 F11RQ9Y624 299 aaKnown RBP11.77□□□□□ -0.53
USE1-206ENST00000595101 NXPH3O95157 252 aa11.76□□□□□ -0.53
USE1-206ENST00000595101 DHFRP00374 187 aa11.76□□□□□ -0.53
USE1-206ENST00000595101 PPP1R1AQ13522 171 aa11.76□□□□□ -0.53
USE1-206ENST00000595101 ANKRD55Q3KP44 614 aa11.76□□□□□ -0.53
USE1-206ENST00000595101 OR2C3Q8N628 320 aa11.76□□□□□ -0.53
USE1-206ENST00000595101 CACNG5Q9UF02 275 aa11.76□□□□□ -0.53
USE1-206ENST00000595101 PFDN2Q9UHV9 154 aa11.76□□□□□ -0.53
USE1-206ENST00000595101 WI2-2373I1.2A0A1W2PRP0 233 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 PFDN1O60925 122 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 SAP30O75446 220 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 OR2C1O95371 312 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 IFNA17P01571 189 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 RBMS2Q15434 407 aaKnown RBP11.75□□□□□ -0.53
USE1-206ENST00000595101 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
USE1-206ENST00000595101 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 C9orf66Q5T8R8 295 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 ACSM6Q6P461 480 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 IL34Q6ZMJ4 242 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 PTTG2Q9NZH5 202 aa11.75□□□□□ -0.53
USE1-206ENST00000595101 ATG12O94817 140 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 NDUFB6O95139 128 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 IGHV3-48P01763 117 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 CLEC3BP05452 202 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
USE1-206ENST00000595101 EDN2P20800 178 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 ZP3P21754 424 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 HSD17B13Q7Z5P4 300 aaPredicted RBP11.74□□□□□ -0.53
USE1-206ENST00000595101 PLEKHA3Q9HB20 300 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 K7EIM0 57 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 TSC22D2O75157 780 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 CENPSQ8N2Z9 138 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 ZNF502Q8TBZ5 544 aa11.74□□□□□ -0.53
USE1-206ENST00000595101 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
USE1-206ENST00000595101 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
USE1-206ENST00000595101 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
USE1-206ENST00000595101 K7EIL1 84 aa11.73□□□□□ -0.53
USE1-206ENST00000595101 GPR183P32249 361 aa11.73□□□□□ -0.53
USE1-206ENST00000595101 NMSQ5H8A3 153 aa11.73□□□□□ -0.53
USE1-206ENST00000595101 FAM219AQ8IW50 185 aa11.73□□□□□ -0.53
USE1-206ENST00000595101 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
USE1-206ENST00000595101 SCARB1Q8WTV0 552 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms