RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 TMEM17Q86X19 198 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 SPARTQ8N0X7 666 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 OR5H6Q8NGV6 325 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 OR5B3Q8NH48 314 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 SLC25A38Q96DW6 304 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 OR10C1Q96KK4 312 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 TSC22D3Q99576 134 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 RHPN1-AS1Q9BWJ2 59 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 PRNDQ9UKY0 176 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 ANKRD65E5RJM6 399 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 CHEK1O14757 476 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
VMP1-209ENST00000588915 PGLYRP1O75594 196 aaPredicted RBP10.28□□□□□ -0.76
VMP1-209ENST00000588915 LPAR6P43657 344 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 PAFAH1B2P68402 229 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 Q56UQ5 140 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 CMTM1Q8IZ96 169 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 DGCR14Q96DF8 476 aaKnown RBP10.28□□□□□ -0.76
VMP1-209ENST00000588915 CMTM3Q96MX0 182 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 RNF2Q99496 336 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 HINT2Q9BX68 163 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
VMP1-209ENST00000588915 OR51B2Q9Y5P1 312 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 VPS13DQ5THJ4 4388 aa10.28□□□□□ -0.76
VMP1-209ENST00000588915 DEDDO75618 318 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 KRASP01116 189 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 MFAP4P55083 255 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 RBMS2Q15434 407 aaKnown RBP10.27□□□□□ -0.77
VMP1-209ENST00000588915 IDNKQ5T6J7 187 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 FAM90A2PQ658T7 463 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 UBAC2Q8NBM4 344 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 FCAMRQ8WWV6 532 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 MOB3AQ96BX8 217 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 YTHDF1Q9BYJ9 559 aaKnown RBP10.27□□□□□ -0.77
VMP1-209ENST00000588915 TMEM14BQ9NUH8 114 aa10.27□□□□□ -0.77
VMP1-209ENST00000588915 TRAV14DV4A0A0A6YYC5 116 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 IGHV3-21A0A0B4J1V1 117 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 XRCC3O43542 346 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 ZNF207O43670 478 aaKnown RBP10.26□□□□□ -0.77
VMP1-209ENST00000588915 DFFBO76075 338 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 RLN1P04808 185 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 MXD1Q05195 221 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 TSPAN14Q8NG11 270 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 OR11H2Q8NH07 326 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 C2CD4CQ8TF44 421 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 ZNF414Q96IQ9 312 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 NXF2Q9GZY0 626 aaKnown RBP10.26□□□□□ -0.77
VMP1-209ENST00000588915 IFT46Q9NQC8 304 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 EHFQ9NZC4 300 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 ANAPC10Q9UM13 185 aa10.26□□□□□ -0.77
VMP1-209ENST00000588915 IGHV3OR16-8A0A075B7F1 116 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 C15orf61A6NNL5 157 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 I3L2K1 104 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 CLEC2LP0C7M8 214 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 NAT1P18440 290 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 RFX2P48378 723 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 CROCCP3Q8IVE0 287 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 ZNF114Q8NC26 417 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 S100A16Q96FQ6 103 aaKnown RBP10.25□□□□□ -0.77
VMP1-209ENST00000588915 GINS3Q9BRX5 216 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 ZNF2Q9BSG1 426 aaPredicted RBP10.25□□□□□ -0.77
VMP1-209ENST00000588915 NSG2Q9Y328 171 aa10.25□□□□□ -0.77
VMP1-209ENST00000588915 TRAV2A0A0B4J234 112 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 GPR31O00270 319 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 YIF1AO95070 293 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 FCER2P06734 321 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 S100GP29377 79 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 G6PCP35575 357 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 TAS2R46P59540 309 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 NANOS2P60321 138 aaKnown RBP10.24□□□□□ -0.77
VMP1-209ENST00000588915 TMEM187Q14656 261 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 OR6F1Q8NGZ6 308 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 SLC25A46Q96AG3 418 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 HRH4Q9H3N8 390 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 VSIRQ9H7M9 311 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 DNAH6Q9C0G6 4158 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
VMP1-209ENST00000588915 EIF4EP06730 217 aaKnown RBP10.23□□□□□ -0.77
VMP1-209ENST00000588915 ZNF124Q15973 351 aa10.23□□□□□ -0.77
VMP1-209ENST00000588915 LPCAT3Q6P1A2 487 aa10.23□□□□□ -0.77
VMP1-209ENST00000588915 TCF24Q7RTU0 167 aa10.23□□□□□ -0.77
VMP1-209ENST00000588915 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
VMP1-209ENST00000588915 FBXL17Q9UF56 701 aa10.23□□□□□ -0.77
VMP1-209ENST00000588915 MEIS3P1A6NDR6 274 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 DBX1A6NMT0 343 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 GNG7O60262 68 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 MT-CO2P00403 227 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 CA1P00915 261 aaPredicted RBP10.22□□□□□ -0.77
VMP1-209ENST00000588915 TFPI2P48307 235 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 HSPE1P61604 102 aaKnown RBP10.22□□□□□ -0.77
VMP1-209ENST00000588915 ERHP84090 104 aaKnown RBP10.22□□□□□ -0.77
VMP1-209ENST00000588915 TMEM41BQ5BJD5 291 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 OR4A16Q8NH70 328 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 SEC22AQ96IW7 307 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms