RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	IGHV3-43D	P0DP04	118 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	BCL2	P10415	239 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	G6PC	P35575	357 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	P2RY6	Q15077	328 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	RNPS1	Q15287	305 aa	Known RBP	9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	MDP1	Q86V88	176 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ZNF738	Q8NE65	137 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	BAALC	Q8WXS3	180 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR5P3	Q8WZ94	311 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	GALM	Q96C23	342 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SMIM7	Q9BQ49	75 aa		9.64	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	IGKV3D-15	A0A087WSY6	115 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	MAP1LC3B2	A6NCE7	125 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	DEGS1	O15121	323 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	RBFOX2	O43251	390 aa	Known RBP eCLIP	9.63	□□□□□ -0.87	2e-11	■□□□□ 9.3
CDK5RAP3-231	ENST00000584063	PSG1	P11464	419 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ZNF324B	Q6AW86	544 aa	Predicted RBP	9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	WFDC3	Q8IUB2	231 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR10V1	Q8NGI7	309 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	RFESD	Q8TAC1	157 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ZDHHC16	Q969W1	377 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	MAP1LC3B	Q9GZQ8	125 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	KIR2DL5B	A0A0G2JN68	375 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	KIR2DL5B	A0A0G2JPC4	375 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ZNF737	O75373	536 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	CRYAA	P02489	173 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	RELB	Q01201	579 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ZNF826P	Q6ZT77	177 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	C16orf82	Q7Z2V1	217 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	C1QL4	Q86Z23	238 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	KIR2DL5A	Q8N109	375 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ZNF525	Q8N782	197 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	KIR2DL5B	Q8NHK3	375 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	FLYWCH2	Q96CP2	140 aa	Known RBP	9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	FAM234A	Q9H0X4	552 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	FZR1	Q9UM11	496 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	HEATR1	Q9H583	2144 aa	Known RBP	9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	KIR2DS1	A0A191URI9	304 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	CLDN34	H7C241	214 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	DLL1	O00548	723 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	HPRT1	P00492	218 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	IGLV2-14	P01704	120 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ESD	P10768	282 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	MDH2	P40926	338 aa	Known RBP	9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	KIR2DS4	P43632	304 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	KIR2DS1	Q14954	304 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SPATA31B1P	Q5VZV4	182 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	RPP25L	Q8N5L8	163 aa	Known RBP	9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	APOBEC3D	Q96AK3	386 aa	Predicted RBP	9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SLC39A9	Q9NUM3	307 aa		9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	BEX4	Q9NWD9	120 aa	Predicted RBP	9.63	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SPTBN1	Q01082	2364 aa	Known RBP	9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	WNT9B	O14905	357 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	FAM3B	P58499	235 aa	Predicted RBP	9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	COL10A1	Q03692	680 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	FOXF2	Q12947	444 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR4F5	Q8NH21	305 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR4X1	Q8NH49	305 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR4F4	Q96R69	305 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	HIST1H2BL	Q99880	126 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ENY2	Q9NPA8	101 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	PKDREJ	Q9NTG1	2253 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	CD33	P20138	364 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	PLP2	Q04941	152 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	TFF3	Q07654	80 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR51G1	Q8NGK1	321 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SDSL	Q96GA7	329 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	RCHY1	Q96PM5	261 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	HSPB8	Q9UJY1	196 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063		V9GYY9	64 aa		9.62	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063		A0A1B0GU03	582 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063		A0A1B0GW64	132 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	NPIPB5	A8MRT5	1133 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	CTDSP1	Q9GZU7	261 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SDF2L1	Q9HCN8	221 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	TMPRSS2	O15393	492 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	AGFG2	O95081	481 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR2H2	O95918	312 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	HBE1	P02100	147 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR5G3	P0C626	314 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SLC38A11	Q08AI6	406 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	FAM78B	Q5VT40	261 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ZNF66	Q6ZN08	573 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	OR1L1	Q8NH94	360 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	GP6	Q9HCN6	339 aa		9.61	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	PLCE1	Q9P212	2302 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SS18L1	O75177	396 aa	Predicted RBP	9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	ADH4	P08319	380 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	PAFAH1B2	P68402	229 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	TGFBR3	Q03167	851 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	RPRML	Q8N4K4	120 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	DRAM1	Q8N682	238 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	C9orf106	Q8NAJ2	232 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	SARAF	Q96BY9	339 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	C20orf144	Q9BQM9	153 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	NAA38	Q9BRA0	125 aa	Known RBP	9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	LINC00470	Q9BZP3	86 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	PPIAL4A	Q9Y536	164 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063		A0A087WWC5	75 aa		9.6	□□□□□ -0.87
CDK5RAP3-231	ENST00000584063	MBD3L4	A6NDZ8	208 aa	Predicted RBP	9.6	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms