RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 LGALSLQ3ZCW2 172 aaPredicted RBP5.67□□□□□ -1.5
CCDC47-205ENST00000582331 SLC25A42Q86VD7 318 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 LHFPL1Q86WI0 220 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 C12orf45Q8N5I9 185 aaPredicted RBP5.67□□□□□ -1.5
CCDC47-205ENST00000582331 OR2T35Q8NGX2 323 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 MRPL30Q8TCC3 161 aaKnown RBP5.67□□□□□ -1.5
CCDC47-205ENST00000582331 ABHD14BQ96IU4 210 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 HSF4Q9ULV5 492 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 MGAT4AQ9UM21 535 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 HSPB11Q9Y547 144 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 DYNC1H1Q14204 4646 aaKnown RBP5.67□□□□□ -1.5
CCDC47-205ENST00000582331 FAT2Q9NYQ8 4349 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 IGKV1D-8A0A087WSZ0 117 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 A0A1B0GVY2 172 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 FAM90A23PA8MXZ1 464 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 RBMXL2O75526 392 aaKnown RBP5.66□□□□□ -1.5
CCDC47-205ENST00000582331 IFNA4P05014 189 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 HLA-GP17693 338 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 EDN2P20800 178 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 FUT3P21217 361 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 CBLN1P23435 193 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 H2BFSP57053 126 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 TCTAP57738 103 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 UBE2MP61081 183 aaKnown RBP5.66□□□□□ -1.5
CCDC47-205ENST00000582331 SSBP2P81877 361 aaPredicted RBP5.66□□□□□ -1.5
CCDC47-205ENST00000582331 ATP5G2Q06055 141 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 DHRS2Q13268 280 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 ARFRP1Q13795 201 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 DEFB135Q30KP9 77 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 SCGB2B2Q4G0G5 96 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 C6orf201Q7Z4U5 140 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 ARRDC1Q8N5I2 433 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 TERB2Q8NHR7 220 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 IL1F10Q8WWZ1 152 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 ZNF230Q9UIE0 474 aaPredicted RBP5.66□□□□□ -1.5
CCDC47-205ENST00000582331 GPR132Q9UNW8 380 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 SELENOKQ9Y6D0 94 aa5.66□□□□□ -1.5
CCDC47-205ENST00000582331 DNAH2Q9P225 4427 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.65□□□□□ -1.5
CCDC47-205ENST00000582331 C9orf170A2RU37 121 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 FAM90A7PA6NKC0 464 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 FAM223BA6NKX1 122 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 GOSR2O14653 212 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 ITGB1BP1O14713 200 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 TUSC2O75896 110 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 SCAF4O95104 1147 aaKnown RBP5.65□□□□□ -1.5
CCDC47-205ENST00000582331 IGKV1-16P04430 117 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 OR9G9P0C7N8 305 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 APELAP0DMC3 54 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 DTYMKP23919 212 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 RHOGP84095 191 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 PJVKQ0ZLH3 352 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 PPP1R1AQ13522 171 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 EXOSC2Q13868 293 aaKnown RBP5.65□□□□□ -1.5
CCDC47-205ENST00000582331 HMGN3Q15651 99 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 NDUFA5Q16718 116 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 C4orf46Q504U0 113 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 TM4SF20Q53R12 229 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 TMED4Q7Z7H5 227 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 PDPNQ86YL7 162 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 FAM223AQ8IWN6 122 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 SLC7A5P1Q8MH63 180 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 TMEM61Q8N0U2 210 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 STPG3Q8N7X2 389 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 UXS1Q8NBZ7 420 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 ADAD2Q8NCV1 583 aaKnown RBP5.65□□□□□ -1.5
CCDC47-205ENST00000582331 OR5AP2Q8NGF4 316 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 OR5H2Q8NGV7 314 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 MARCH1Q8TCQ1 289 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 C2CD4CQ8TF44 421 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 TMEM230Q96A57 120 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 RNF183Q96D59 192 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 FAM210AQ96ND0 272 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 PHB2Q99623 299 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 SULT4A1Q9BR01 284 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 HDHD3Q9BSH5 251 aaPredicted RBP5.65□□□□□ -1.5
CCDC47-205ENST00000582331 FAAP24Q9BTP7 215 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 MFFQ9GZY8 342 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 PLEKHJ1Q9NW61 149 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 AK3Q9UIJ7 227 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 DNAH17Q9UFH2 4485 aa5.65□□□□□ -1.5
CCDC47-205ENST00000582331 A0A0B4J2A0 478 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 LGALS9O00182 355 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 GGCTO75223 188 aaKnown RBP5.64□□□□□ -1.51
CCDC47-205ENST00000582331 PDCD6O75340 191 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 PROP1O75360 226 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 SLC22A5O76082 557 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 OR2C1O95371 312 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 MPC2O95563 127 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 APOA2P02652 100 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 CRYGBP07316 175 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 CXCL2P19875 107 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 LINC00205P59089 165 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 TAS2R46P59540 309 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
CCDC47-205ENST00000582331 TSPAN5P62079 268 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 FAM209BQ5JX69 171 aa5.64□□□□□ -1.51
CCDC47-205ENST00000582331 AADACL3Q5VUY0 350 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms