RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TMEM140Q9NV12 185 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 GAR1Q9NY12 217 aaKnown RBP10.12□□□□□ -0.79
TRAF4-214ENST00000580073 BET1LQ9NYM9 111 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 COMMD9Q9P000 198 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 COPZ2Q9P299 210 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 C14orf166Q9Y224 244 aaKnown RBP10.12□□□□□ -0.79
TRAF4-214ENST00000580073 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 DNAH1Q9P2D7 4330 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 TRBV9A0A0B4J1U6 114 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 TEX13DA0A0J9YY54 714 aaPredicted RBP10.11□□□□□ -0.79
TRAF4-214ENST00000580073 MARCH11A6NNE9 402 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 BMPR1BO00238 502 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 GGCTO75223 188 aaKnown RBP10.11□□□□□ -0.79
TRAF4-214ENST00000580073 NDUFB6O95139 128 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 APELAP0DMC3 54 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 UCP1P25874 307 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 INPP1P49441 399 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 DEFA5Q01523 94 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 TMEM187Q14656 261 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 GUCA2BQ16661 112 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 ANKRD55Q3KP44 614 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 CD300EQ496F6 205 aaPredicted RBP10.11□□□□□ -0.79
TRAF4-214ENST00000580073 WDR12Q9GZL7 423 aaKnown RBP10.11□□□□□ -0.79
TRAF4-214ENST00000580073 ZC4H2Q9NQZ6 224 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 NSG2Q9Y328 171 aa10.11□□□□□ -0.79
TRAF4-214ENST00000580073 IZUMO1RA6ND01 250 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 NAP1L6A6NFF2 107 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 HMX3A6NHT5 357 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 OR11H12B2RN74 326 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 TEX22C9J3V5 150 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 LGALS9O00182 355 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 LYRM1O43325 122 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 RBMXL2O75526 392 aaKnown RBP10.1□□□□□ -0.79
TRAF4-214ENST00000580073 UPK1BO75841 260 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 AKR1C4P17516 323 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 MECP2P51608 486 aaKnown RBP10.1□□□□□ -0.79
TRAF4-214ENST00000580073 DHODHQ02127 395 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 C15orf32Q32M92 178 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 LINC00322Q6ZN03 302 aaPredicted RBP10.1□□□□□ -0.79
TRAF4-214ENST00000580073 C19orf35Q6ZS72 473 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 SELENOHQ8IZQ5 122 aaKnown RBP10.1□□□□□ -0.79
TRAF4-214ENST00000580073 TTC9CQ8N5M4 171 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 CCDC71LQ8N9Z2 235 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 SLC25A21Q9BQT8 299 aaPredicted RBP10.1□□□□□ -0.79
TRAF4-214ENST00000580073 TMEM222Q9H0R3 208 aa10.1□□□□□ -0.79
TRAF4-214ENST00000580073 EPPK1P58107 5090 aaKnown RBP10.1□□□□□ -0.79
TRAF4-214ENST00000580073 C2orf70A6NJV1 201 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 CDS2O95674 445 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 HIST1H1BP16401 226 aaKnown RBP10.09□□□□□ -0.79
TRAF4-214ENST00000580073 S100GP29377 79 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 MAS1LP35410 378 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 RPL8P62917 257 aaKnown RBP10.09□□□□□ -0.79
TRAF4-214ENST00000580073 Q6ZRM9 215 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 TMED4Q7Z7H5 227 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 DMBX1Q8NFW5 382 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 OR4A5Q8NH83 315 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 GALNT14Q96FL9 552 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 FAM110AQ9BQ89 295 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 C7orf50Q9BRJ6 194 aaKnown RBP10.09□□□□□ -0.79
TRAF4-214ENST00000580073 RETNQ9HD89 108 aa10.09□□□□□ -0.79
TRAF4-214ENST00000580073 A0A0B4J293 547 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 TEX50A0A1B0GTY4 177 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 SERPINE2P07093 398 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 FOLR2P14207 255 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 HLA-GP17693 338 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 OR2B8PP59922 312 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 ASAH1Q13510 395 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 PPP1R1AQ13522 171 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 RBMS2Q15434 407 aaKnown RBP10.08□□□□□ -0.8
TRAF4-214ENST00000580073 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 FAM106AQ4KMX7 169 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 CADM3Q8N126 398 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 DEFB125Q8N687 156 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 EEF1AKMT3Q96AZ1 226 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 TMEM56Q96MV1 263 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 SCGB3A2Q96PL1 93 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 AIFM2Q9BRQ8 373 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 TMEM56-RWDD3S4R434 201 aa10.08□□□□□ -0.8
TRAF4-214ENST00000580073 A8MWP6 167 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 CYB5BO43169 146 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 OR2J3O76001 311 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 NDUFB8O95169 186 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 CD7P09564 240 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 AREGP15514 252 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 ANXA7P20073 488 aaKnown RBP10.07□□□□□ -0.8
TRAF4-214ENST00000580073 ARL3P36405 182 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
TRAF4-214ENST00000580073 TRIM16LQ309B1 348 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 GPHB5Q86YW7 130 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 OR52B4Q8NGK2 314 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 GPR146Q96CH1 333 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 FYTTD1Q96QD9 318 aaKnown RBP10.07□□□□□ -0.8
TRAF4-214ENST00000580073 GGTLC1Q9BX51 225 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 FBXL7Q9UJT9 491 aa10.07□□□□□ -0.8
TRAF4-214ENST00000580073 IGLC7A0M8Q6 106 aa10.06□□□□□ -0.8
TRAF4-214ENST00000580073 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
TRAF4-214ENST00000580073 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
TRAF4-214ENST00000580073 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms