RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	IGKV1OR2-108	A0A075B7D4	117 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	IGKV3-15	P01624	115 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	OR5G3	P0C626	314 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	CAMP	P49913	170 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	GNG5	P63218	68 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	HTD2	P86397	168 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	JOSD1	Q15040	202 aa	Predicted RBP	12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	FAM168A	Q92567	244 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	TMEM18	Q96B42	140 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	MCRIP2	Q9BUT9	160 aa	Known RBP	12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	SSBP4	Q9BWG4	385 aa	Predicted RBP	12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	WNT10A	Q9GZT5	417 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	NAT8B	Q9UHF3	227 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	HPRT1	P00492	218 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	MOS	P00540	346 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	KLF3	P57682	345 aa	Predicted RBP	12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	CIB3	Q96Q77	187 aa	Predicted RBP	12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001	CTDSP1	Q9GZU7	261 aa		12.15	□□□□□ -0.46
PRPF8-216	ENST00000577001		A0A1W2PN81	502 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001		M0QZ24	198 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001	MRPL18	Q9H0U6	180 aa	Known RBP	12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001	PARD6A	Q9NPB6	346 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001	TMEM250	H0YL14	139 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001		P0C879	139 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001	RUSC1-AS1	Q66K80	236 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001	REC114	Q7Z4M0	266 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001	BTF3L4	Q96K17	158 aa		12.14	□□□□□ -0.47
PRPF8-216	ENST00000577001	NPIPB11	E5RHQ5	1161 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	MB	P02144	154 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	ORM2	P19652	201 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	LOXL3	P58215	753 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	CENPW	Q5EE01	88 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	ST6GALNAC3	Q8NDV1	305 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	SARAF	Q96BY9	339 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	RITA1	Q96K30	269 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	HES4	Q9HCC6	221 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	LY6H	O94772	140 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	IRF2	P14316	349 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	STUM	Q69YW2	141 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	TEPP	Q6URK8	271 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	CMTM2	Q8TAZ6	248 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	LURAP1	Q96LR2	239 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	IER2	Q9BTL4	223 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	TPSG1	Q9NRR2	321 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	SLC35D1	Q9NTN3	355 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	RAN	P62826	216 aa	Known RBP	12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	MAJIN	Q3KP22	176 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001		Q71RC1	249 aa	Predicted RBP	12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	NABP2	Q9BQ15	211 aa		12.13	□□□□□ -0.47
PRPF8-216	ENST00000577001	TMEM210	A6NLX4	147 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	CRISP2	P16562	243 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	PMCHL1	Q16048	86 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	ATP6V1F	Q16864	119 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	C17orf58	Q2M2W7	97 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	MRPL20	Q9BYC9	149 aa	Known RBP	12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	ELOVL5	Q9NYP7	299 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	FAM90A26	D6RGX4	464 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	MGST3	O14880	152 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	KLK10	O43240	276 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	ACTL10	Q5JWF8	245 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	LCN12	Q6JVE5	192 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.12	□□□□□ -0.47	1e-7	■■■■□ 26.5
PRPF8-216	ENST00000577001	VDAC2	P45880	294 aa	Predicted RBP	12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	LYPD2	Q6UXB3	125 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	DBX2	Q6ZNG2	339 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	CISD2	Q8N5K1	135 aa	Known RBP	12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	NPVF	Q9HCQ7	196 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	IDI2-AS1	Q9NZ38	188 aa		12.12	□□□□□ -0.47
PRPF8-216	ENST00000577001	BSN	Q9UPA5	3926 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001		A8MWP6	167 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	SRRM5	B3KS81	715 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	RCHY1	Q96PM5	261 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	TUBG2	Q9NRH3	451 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	TRGV10	A0A0A0MS01	117 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	TRAV17	A0A0B4J275	112 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	HELT	A6NFD8	242 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	TCAP	O15273	167 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	WNT2	P09544	360 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	TRAT1	Q6PIZ9	186 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	MMD2	Q8IY49	270 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	SNHG12	Q9BXW3	62 aa		12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	MRPL36	Q9P0J6	103 aa	Known RBP	12.11	□□□□□ -0.47
PRPF8-216	ENST00000577001	IGHV3OR16-8	A0A075B7F1	116 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	PRR33	A8MZF0	331 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	CORT	O00230	105 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	GNG4	P50150	75 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001		Q6ZWC4	215 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	HARBI1	Q96MB7	349 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	ZNF355P	Q9NSJ1	428 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	ADH4	P08319	380 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	SAA1	P0DJI8	122 aa	Predicted RBP	12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	OPRK1	P41145	380 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	ZNF137P	P52743	207 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	NPIPB3	Q92617	1050 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	ST6GALNAC6	Q969X2	333 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	NAGK	Q9UJ70	344 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	TP53TG3	Q9ULZ0	132 aa		12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms