RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 OR4A5Q8NH83 315 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 CD300LFQ8TDQ1 290 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 DCUN1D4Q92564 292 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 DLX4Q92988 240 aaPredicted RBP4.46□□□□□ -1.7
CDH13-206ENST00000562601 BORCS5Q969J3 196 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 TP53RKQ96S44 253 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 SPIN2AQ99865 258 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 SPIN2BQ9BPZ2 258 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 AIFM2Q9BRQ8 373 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 HINT2Q9BX68 163 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 SLA2Q9H6Q3 261 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 PLEKHA2Q9HB19 425 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 SLC2A9Q9NRM0 540 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 MCUBQ9NWR8 336 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 BET1LQ9NYM9 111 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 COPZ2Q9P299 210 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 OR51B2Q9Y5P1 312 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 V9GYH0 126 aa4.46□□□□□ -1.7
CDH13-206ENST00000562601 IGHV3-21A0A0B4J1V1 117 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 C3orf85A0A1B0GTC6 90 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 LINC00854A0A1B0GVQ3 168 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 ANKRD20A5PA0PJZ0 165 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 SEC14L6B5MCN3 397 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 PPP5D1E7EU14 171 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 H3BUA1 57 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 ZNF701M0R085 212 aaPredicted RBP4.45□□□□□ -1.7
CDH13-206ENST00000562601 NDUFB8O95169 186 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 HSPB1P04792 205 aaKnown RBP4.45□□□□□ -1.7
CDH13-206ENST00000562601 SERPINE2P07093 398 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 OR8U8P0C7N1 319 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 DEFA4P12838 97 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 TBPP20226 339 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 PSMB6P28072 239 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 S100GP29377 79 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 SSBP1Q04837 148 aaKnown RBP4.45□□□□□ -1.7
CDH13-206ENST00000562601 ATP5G2Q06055 141 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 FHL3Q13643 280 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 ZNF79Q15937 498 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 POU2AF1Q16633 256 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 PDLIM3Q53GG5 364 aaPredicted RBP4.45□□□□□ -1.7
CDH13-206ENST00000562601 SPINK9Q5DT21 86 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 KPRPQ5T749 579 aaPredicted RBP4.45□□□□□ -1.7
CDH13-206ENST00000562601 Q6ZNX1 250 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 CCDC190Q86UF4 302 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 Q8N402 240 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 ARRDC1Q8N5I2 433 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 OR6Q1Q8NGQ2 317 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 ZFAND1Q8TCF1 268 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 SEC22AQ96IW7 307 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 TMEM68Q96MH6 324 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 RTBDNQ9BSG5 229 aaPredicted RBP4.45□□□□□ -1.7
CDH13-206ENST00000562601 COMMD5Q9GZQ3 224 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 COMMD9Q9P000 198 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 RABL2AQ9UBK7 228 aaPredicted RBP4.45□□□□□ -1.7
CDH13-206ENST00000562601 RABL2BQ9UNT1 228 aa4.45□□□□□ -1.7
CDH13-206ENST00000562601 COL7A1Q02388 2944 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 TRBV9A0A0B4J1U6 114 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 A0A0G2JLM5 398 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 TEX13DA0A0J9YY54 714 aaPredicted RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 WI2-2373I1.2A0A1W2PRP0 233 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 IGLC7A0M8Q6 106 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 ZNF785A8K8V0 405 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 NPIPB5A8MRT5 1133 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 H0Y980 276 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 OVOL1O14753 267 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 SAP30O75446 220 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 SNAPC5O75971 98 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 IGKV1-5P01602 117 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 HLA-AP01891 365 aaKnown RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 CTSDP07339 412 aaPredicted RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 OR5AC1P0C628 307 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 TRAPPC2P0DI81 140 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 TRAPPC2BP0DI82 140 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 OR13C7P0DN81 318 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 AKR1C4P17516 323 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 SYNJ2BPP57105 145 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 RND3P61587 244 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 EXOSC2Q13868 293 aaKnown RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 KLF9Q13886 244 aaPredicted RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 TRIM16LQ309B1 348 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 C15orf32Q32M92 178 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 DEFB121Q5J5C9 76 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 ZNF57Q68EA5 555 aaPredicted RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 SLC25A24Q6NUK1 477 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 H2BFWTQ7Z2G1 175 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 SLC25A42Q86VD7 318 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 TOMM5Q8N4H5 51 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 CCDC71LQ8N9Z2 235 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 OR4A16Q8NH70 328 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 MRAPQ8TCY5 172 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 ZNF486Q96H40 463 aaPredicted RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 USMG5Q96IX5 58 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 PRR25Q96S07 402 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 C5orf66Q9H5L9 145 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 RANGRFQ9HD47 186 aaPredicted RBP4.44□□□□□ -1.7
CDH13-206ENST00000562601 ZC4H2Q9NQZ6 224 aa4.44□□□□□ -1.7
CDH13-206ENST00000562601 PEF1Q9UBV8 284 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms