RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TRAV9-2A0A087WT02 112 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 TDRD6O60522 2096 aaKnown RBP8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 SCN8AQ9UQD0 1980 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 UBE2L6O14933 153 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 LINC00614P0C842 121 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 UNQ5815/PRO19632Q6UWF5 114 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 TRAV24A0A0B4J272 114 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 SS18L1O75177 396 aaPredicted RBP8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 IFI27L2Q9H2X8 130 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 NHP2Q9NX24 153 aaKnown RBP8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 SHANK3Q9BYB0 1731 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 IGHV3-66A0A0C4DH42 116 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 A0A1W2PRS3 328 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 SYNGR3O43761 229 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 CCDC144NLQ6NUI1 221 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 WDR82Q6UXN9 313 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 COL24A1Q17RW2 1714 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 A0A1B0GUT8 65 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 DLEU1O43261 78 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 PCOLCEQ15113 449 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 MEIG1Q5JSS6 88 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 PAQR4Q8N4S7 273 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 TMEM105Q8N8V8 129 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 PRB4P10163 310 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 ZNF56Q15929 161 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 GPX1P07203 203 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 OCC1Q8TAD7 63 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 NEUROG1Q92886 237 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 C5orf30Q96GV9 206 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 TDRD15B5MCY1 1934 aaKnown RBP8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 TRAV9-1A0A075B6T8 112 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 CD33P20138 364 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 MEF2CQ06413 473 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 RIPPLY2Q5TAB7 128 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 CDCP2Q5VXM1 449 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 EBLN2Q6P2I7 272 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 ELOVL5Q9NYP7 299 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 NPIPB6E9PJ23 425 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 OR13A1Q8NGR1 328 aa8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 C11orf68Q9H3H3 251 aaKnown RBP8.6□□□□□ -1.03
GTF3C1-202ENST00000561623 J3QW42 95 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 C1orf174Q8IYL3 243 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 HS3ST3B1Q9Y662 390 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 M0R381 172 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 TNFSF13O75888 250 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 COX6A1P12074 109 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 SPACA3Q8IXA5 215 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 CHRNA10Q9GZZ6 450 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 RGPD3A6NKT7 1758 aaPredicted RBP8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 IGHV3-49A0A0A0MS15 119 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 IGKV1-9A0A0C4DH69 117 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 NPIPB13A6NJU9 1138 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 NPIPB4C9JG80 1138 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 RAMP3O60896 148 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 ADCYAP1P18509 176 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 SLC25A45Q8N413 288 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 TEX45Q8NA69 505 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 SSC4DQ8WTU2 575 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 CEP290O15078 2479 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 LYPD3O95274 346 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 LEPP41159 167 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 LYZL4Q96KX0 146 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 SCGB3A1Q96QR1 104 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 CRIM1Q9NZV1 1036 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 RNF115Q9Y4L5 304 aa8.59□□□□□ -1.03
GTF3C1-202ENST00000561623 TIAF1O95411 115 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM95Q3KNT9 176 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 FAM201AQ5SY85 155 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 OR52E5Q8NH55 327 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 ANKRD36A6QL64 1941 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 PPP1R17O96001 155 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 LTBRP36941 435 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 KIR2DL4Q99706 377 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 ZNF257Q9Y2Q1 563 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 COX5BP10606 129 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 MST1P26927 711 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 STARD6P59095 220 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM256Q8N2U0 113 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 IGHV3OR16-8A0A075B7F1 116 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 C5orf67F2Z3F1 127 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 SIGMAR1Q99720 223 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 IGKV3-20P01619 116 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 RFPL3SP0C7P2 107 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 PLPPR1Q8TBJ4 325 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 Q9H3A6 140 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 TRAV8-2A0A0B4J237 113 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 COL11A1P12107 1806 aaPredicted RBP8.58□□□□□ -1.04
GTF3C1-202ENST00000561623 TRAV30A0A087WSZ9 112 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 TMEM50AO95807 157 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 TFF1P04155 84 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 OR13C6PQ8NH95 151 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 FAM106CPP0CH98 169 aa8.57□□□□□ -1.04
GTF3C1-202ENST00000561623 C1orf194Q5T5A4 169 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms