RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 TRBV20OR9-2A0A075B6H5 130 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 A0A087WUJ7 227 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 LOC110117498A0A087WWA1 95 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 TGIF2-C20orf24A0A0A6YYL0 155 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 IGKV3D-7A0A0C4DH55 119 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 IGKV3OR2-268A0A0C4DH90 116 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 GGT3PA6NGU5 568 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 C19orf84I3L1E1 186 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 KCNK1O00180 336 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 KPNA3O00505 521 aaPredicted RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 FAAHO00519 579 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 SLC22A1O15245 554 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 CHP2O43745 196 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 ORC5O43913 435 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 IGKV1-5P01602 117 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 HLA-DRB1P01911 266 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 PMP2P02689 132 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 TTRP02766 147 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 IFNA16P05015 189 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 CTSDP07339 412 aaPredicted RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 HTR1AP08908 422 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 METTL15P1P0C7V9 234 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 TRGC1P0CF51 173 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 SULT1A3P0DMM9 295 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 SULT1A4P0DMN0 295 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 RPS4Y1P22090 263 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 HAAOP46952 286 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 SULT1A1P50225 295 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 PSME3P61289 254 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 RUNX1Q01196 453 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 IFITM2Q01629 132 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 STX5Q13190 355 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 ELOBQ15370 118 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 GRK1Q15835 563 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 RGS21Q2M5E4 152 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 CCDC122Q5T0U0 273 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 HIST2H3PS2Q5TEC6 136 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 AADACL3Q5VUY0 350 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 PTRHD1Q6GMV3 140 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 FAM173BQ6P4H8 233 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 RPL22L1Q6P5R6 122 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 LCN15Q6UWW0 184 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 ZNF826PQ6ZT77 177 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 DEFB128Q7Z7B8 93 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 C20orf196Q8IYI0 205 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 TMEM86AQ8N2M4 240 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 C12orf29Q8N999 325 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 C15orf53Q8NAA6 179 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 OR8J2Q8NGG1 315 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 TERB2Q8NHR7 220 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 MRPL30Q8TCC3 161 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 C10orf105Q8TEF2 133 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 KLK6Q92876 244 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 TOMM6Q96B49 74 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 PPP1R2P1Q96PQ5 205 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 ADAT1Q9BUB4 502 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 MRPS26Q9BYN8 205 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 YIPF3Q9GZM5 350 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 WDR61Q9GZS3 305 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 MIXL1Q9H2W2 232 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 RNF122Q9H9V4 155 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 CMTM6Q9NX76 183 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 FBXL12Q9NXK8 326 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 VPS29Q9UBQ0 182 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 TP73-AS1Q9UF72 201 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 GUCA1BQ9UMX6 200 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 SOX21Q9Y651 276 aaPredicted RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 DIDO1Q9BTC0 2240 aaKnown RBP0.19□□□□□ -2.38
SPG11-222ENST00000560435 MED13Q9UHV7 2174 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 STRCQ7RTU9 1775 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 NUP155O75694 1391 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 GREB1Q4ZG55 1949 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 MTUS2Q5JR59 1369 aa0.19□□□□□ -2.38
SPG11-222ENST00000560435 COL4A5P29400 1685 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 SNAPC4Q5SXM2 1469 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 NEO1Q92859 1461 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 IGKV3-7A0A075B6H7 116 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 IGKV2-40A0A087WW87 121 aaPredicted RBP0.18□□□□□ -2.38
SPG11-222ENST00000560435 TRAV26-2A0A0B4J265 109 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 A0A0D9SG52 128 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 PQLC2LA1A4F0 135 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 OR4C46A6NHA9 309 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 CLDN24A6NM45 220 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 GOLGA6L19H0YKK7 550 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 BUB1B-PAK6H3BSN5 160 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 SDCBPO00560 298 aaPredicted RBP0.18□□□□□ -2.38
SPG11-222ENST00000560435 OR2T1O43869 369 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 HAND1O96004 215 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 IGKV2D-40P01614 121 aaPredicted RBP0.18□□□□□ -2.38
SPG11-222ENST00000560435 CRPP02741 224 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 PPBPP02775 128 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 SHBGP04278 402 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 SMIM10L2AP0DMW4 78 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 SMIM10L2BP0DMW5 78 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 CD79AP11912 226 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 COX6A1P12074 109 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 HIST1H2BOP23527 126 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 HIST1H2BBP33778 126 aa0.18□□□□□ -2.38
SPG11-222ENST00000560435 RPL5P46777 297 aaKnown RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms