RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 OR8U8P0C7N1 319 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 OPN1MW2P0DN77 364 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 OPN1MW3P0DN78 364 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 HKR1P10072 659 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 SRD5A1P18405 259 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 IER3P46695 156 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 SULT1A1P50225 295 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 PJVKQ0ZLH3 352 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 ZNF266Q14584 549 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 FXYD3Q14802 87 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 ATP6V1FQ16864 119 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 LGALSLQ3ZCW2 172 aaPredicted RBP5.12□□□□□ -1.59
SPG11-221ENST00000560299 TMUB2Q71RG4 321 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 BCL6BQ8N143 479 aaPredicted RBP5.12□□□□□ -1.59
SPG11-221ENST00000560299 C9orf62Q8N4C0 152 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 TMEM86BQ8N661 226 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 TMEM252Q8N6L7 170 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 Q8N9W7 124 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 OR1S2Q8NGQ3 325 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 OR1L6Q8NGR2 347 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 ABHD5Q8WTS1 349 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 SRSF12Q8WXF0 261 aaKnown RBP5.12□□□□□ -1.59
SPG11-221ENST00000560299 C22orf15Q8WYQ4 148 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 PINX1Q96BK5 328 aaKnown RBP5.12□□□□□ -1.59
SPG11-221ENST00000560299 TMEM68Q96MH6 324 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 JMJD8Q96S16 334 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 ARPC5LQ9BPX5 153 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 PLSCR3Q9NRY6 295 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 TET2Q6N021 2002 aaPredicted RBP5.12□□□□□ -1.59
SPG11-221ENST00000560299 PLXNB1O43157 2135 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 RNF222A6NCQ9 220 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 MSGN1A6NI15 193 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 H3BP45 60 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 CORTO00230 105 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 FCN1O00602 326 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 JTBO76095 146 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 CST7O76096 145 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 IFNA5P01569 189 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 OR13C7P0DN81 318 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 CXCL2P19875 107 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 NPY1RP25929 384 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 VDAC2P45880 294 aaPredicted RBP5.11□□□□□ -1.59
SPG11-221ENST00000560299 PAX9P55771 341 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 CX3CL1P78423 397 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 EWSR1Q01844 656 aaKnown RBP eCLIP5.11□□□□□ -1.59
SPG11-221ENST00000560299 OPCMLQ14982 345 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 LY6EQ16553 131 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 C2orf83Q53S99 150 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 SPINK9Q5DT21 86 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 ETFRF1Q6IPR1 90 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 SLC25A24Q6NUK1 477 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 TMEM14EPQ6UXP3 125 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 SLC51BQ86UW2 128 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 TMEM219Q86XT9 240 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 LILRB2Q8N423 598 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 C5orf56Q8N8D9 126 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 SLC24A4Q8NFF2 622 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 PIFOQ8TCI5 191 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 ZNF418Q8TF45 676 aaPredicted RBP5.11□□□□□ -1.59
SPG11-221ENST00000560299 ARPC1AQ92747 370 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 GON7Q9BXV9 100 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 C11orf1Q9H5F2 150 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 TPSG1Q9NRR2 321 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 VPREB3Q9UKI3 123 aa5.11□□□□□ -1.59
SPG11-221ENST00000560299 IGHV7-81A0A0B4J1V7 117 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 MDFIC2A0A1B0GVS7 189 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 RPS10-NUDT3A0A1W2PQS6 291 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 IGSF23A1L1A6 192 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 BCL2L11O43521 198 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 TMEM50AO95807 157 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 IGHV4-59P01825 116 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 METTL15P1P0C7V9 234 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 DEFA4P12838 97 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 MYOD1P15172 320 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 HILS1P60008 231 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 NHLH2Q02577 135 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 SLC38A11Q08AI6 406 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 EXOSC2Q13868 293 aaKnown RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 MRGPRG-AS1Q2M3A8 158 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 ARSJQ5FYB0 599 aaPredicted RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 C9orf152Q5JTZ5 239 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 LAMTOR1Q6IAA8 161 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 OR8G2PQ6IF36 304 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 EIF5AL1Q6IS14 154 aaKnown RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 ETV3LQ6ZN32 361 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 IL17RELQ6ZVW7 336 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 STPG2Q8N412 459 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 TMEM217Q8N7C4 229 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 OR10W1Q8NGF6 305 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 OR5C1Q8NGR4 320 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 OR1P1Q8NH06 330 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 SGMS2Q8NHU3 365 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 SCGB1C1Q8TD33 95 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 RNASEH2CQ8TDP1 164 aaKnown RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 CACNG8Q8WXS5 425 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 RBMXL1Q96E39 390 aaKnown RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 GGACTQ9BVM4 153 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 ZNF471Q9BX82 626 aaPredicted RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 PRSS22Q9GZN4 317 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 NPFFR1Q9GZQ6 430 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms