RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 THOC7Q6I9Y2 204 aaKnown RBP8.79□□□□□ -1
SNX1-204ENST00000559061 ZNF114Q8NC26 417 aa8.79□□□□□ -1
SNX1-204ENST00000559061 OR1N2Q8NGR9 330 aa8.79□□□□□ -1
SNX1-204ENST00000559061 OR4A16Q8NH70 328 aa8.79□□□□□ -1
SNX1-204ENST00000559061 TMEM170AQ8WVE7 144 aa8.79□□□□□ -1
SNX1-204ENST00000559061 HINT2Q9BX68 163 aa8.79□□□□□ -1
SNX1-204ENST00000559061 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
SNX1-204ENST00000559061 F11RQ9Y624 299 aaKnown RBP8.79□□□□□ -1
SNX1-204ENST00000559061 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
SNX1-204ENST00000559061 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
SNX1-204ENST00000559061 TRAV6A0A075B6T7 132 aa8.78□□□□□ -1
SNX1-204ENST00000559061 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.78□□□□□ -1
SNX1-204ENST00000559061 FAM223BA6NKX1 122 aa8.78□□□□□ -1
SNX1-204ENST00000559061 CENPXA8MT69 81 aa8.78□□□□□ -1
SNX1-204ENST00000559061 INS-IGF2F8WCM5 200 aa8.78□□□□□ -1
SNX1-204ENST00000559061 K7EIM0 57 aa8.78□□□□□ -1
SNX1-204ENST00000559061 BMPR1BO00238 502 aa8.78□□□□□ -1
SNX1-204ENST00000559061 NXPH3O95157 252 aa8.78□□□□□ -1
SNX1-204ENST00000559061 IGHV3-23P01764 117 aa8.78□□□□□ -1
SNX1-204ENST00000559061 IGLL1P15814 213 aa8.78□□□□□ -1
SNX1-204ENST00000559061 SPNP16150 400 aa8.78□□□□□ -1
SNX1-204ENST00000559061 EXOSC2Q13868 293 aaKnown RBP8.78□□□□□ -1
SNX1-204ENST00000559061 C15orf32Q32M92 178 aa8.78□□□□□ -1
SNX1-204ENST00000559061 BSXQ3C1V8 233 aa8.78□□□□□ -1
SNX1-204ENST00000559061 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
SNX1-204ENST00000559061 LYG2Q86SG7 212 aa8.78□□□□□ -1
SNX1-204ENST00000559061 C1QL4Q86Z23 238 aa8.78□□□□□ -1
SNX1-204ENST00000559061 FAM219AQ8IW50 185 aa8.78□□□□□ -1
SNX1-204ENST00000559061 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
SNX1-204ENST00000559061 LGI3Q8N145 548 aa8.78□□□□□ -1
SNX1-204ENST00000559061 NECAP1Q8NC96 275 aa8.78□□□□□ -1
SNX1-204ENST00000559061 NUDT15Q9NV35 164 aa8.78□□□□□ -1
SNX1-204ENST00000559061 FBXL7Q9UJT9 491 aa8.78□□□□□ -1
SNX1-204ENST00000559061 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
SNX1-204ENST00000559061 NOTCH1P46531 2555 aa8.77□□□□□ -1
SNX1-204ENST00000559061 ANKRD34BA5PLL1 514 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 ADAP1O75689 374 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 HLA-AP01891 365 aaKnown RBP8.77□□□□□ -1.01
SNX1-204ENST00000559061 PF4P02776 101 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 RNASE2P10153 161 aaKnown RBP8.77□□□□□ -1.01
SNX1-204ENST00000559061 ZNF616Q08AN1 781 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 BEAN1Q3B7T3 259 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 KPRPQ5T749 579 aaPredicted RBP8.77□□□□□ -1.01
SNX1-204ENST00000559061 NRARPQ7Z6K4 114 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 OR52E5Q8NH55 327 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 DCUN1D4Q92564 292 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 DLX4Q92988 240 aaPredicted RBP8.77□□□□□ -1.01
SNX1-204ENST00000559061 RRNAD1Q96FB5 475 aaKnown RBP8.77□□□□□ -1.01
SNX1-204ENST00000559061 USMG5Q96IX5 58 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 SEC22CQ9BRL7 303 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 FKBP11Q9NYL4 201 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 KCNIP3Q9Y2W7 256 aa8.77□□□□□ -1.01
SNX1-204ENST00000559061 IGHV3-21A0A0B4J1V1 117 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 C13orf42A0A1B0GVH6 325 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 DUXBA0A1W2PPF3 345 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 PPP5D1E7EU14 171 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 LINC01619G3V211 115 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 I3L2K1 104 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 ATG12O94817 140 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 HSPB1P04792 205 aaKnown RBP8.76□□□□□ -1.01
SNX1-204ENST00000559061 SULT1A3P0DMM9 295 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 SULT1A4P0DMN0 295 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 EDN2P20800 178 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 HOXD3P31249 432 aaPredicted RBP8.76□□□□□ -1.01
SNX1-204ENST00000559061 RAB25P57735 213 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 SRPXP78539 464 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 GGNBP1Q5YKI7 109 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 IL34Q6ZMJ4 242 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 HSD17B13Q7Z5P4 300 aaPredicted RBP8.76□□□□□ -1.01
SNX1-204ENST00000559061 ZNF502Q8TBZ5 544 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 MITD1Q8WV92 249 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.76□□□□□ -1.01
SNX1-204ENST00000559061 MRPL36Q9P0J6 103 aaKnown RBP8.76□□□□□ -1.01
SNX1-204ENST00000559061 HSPB7Q9UBY9 170 aa8.76□□□□□ -1.01
SNX1-204ENST00000559061 A0A0G2JLM5 398 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 FAM240BA0A1B0GVZ2 78 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 DUS4LO95620 317 aaKnown RBP8.75□□□□□ -1.01
SNX1-204ENST00000559061 HOXB5P09067 269 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 ANXA3P12429 323 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 KRTAP10-11P60412 298 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 SPCS3P61009 180 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 KLF5Q13887 457 aaPredicted RBP8.75□□□□□ -1.01
SNX1-204ENST00000559061 SMCO1Q147U7 214 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 DUSP18Q8NEJ0 188 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 OR1P1Q8NH06 330 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 RNASE11Q8TAA1 199 aaKnown RBP8.75□□□□□ -1.01
SNX1-204ENST00000559061 FNDC4Q9H6D8 234 aaPredicted RBP8.75□□□□□ -1.01
SNX1-204ENST00000559061 PLEKHA3Q9HB20 300 aa8.75□□□□□ -1.01
SNX1-204ENST00000559061 PEF1Q9UBV8 284 aaKnown RBP8.75□□□□□ -1.01
SNX1-204ENST00000559061 A0A1B0GU03 582 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 WIPF1O43516 503 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 IFNA17P01571 189 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 H2AFB2P0C5Z0 115 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 OR8U8P0C7N1 319 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 SLC25A6P12236 298 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 HIST1H1BP16401 226 aaKnown RBP8.74□□□□□ -1.01
SNX1-204ENST00000559061 CD33P20138 364 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 TNFRSF9Q07011 255 aa8.74□□□□□ -1.01
SNX1-204ENST00000559061 C4orf46Q504U0 113 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms