RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 IGHV3-21A0A0B4J1V1 117 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 C3orf85A0A1B0GTC6 90 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 OR2T8A6NH00 312 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 CTDSPLO15194 276 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 TGOLN2O43493 480 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 CD81P60033 236 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 HSPE1P61604 102 aaKnown RBP12.59□□□□□ -0.39
NEDD4-212ENST00000557845 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 ZNF57Q68EA5 555 aaPredicted RBP12.59□□□□□ -0.39
NEDD4-212ENST00000557845 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 OR13C8Q8NGS7 320 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 OR1P1Q8NH06 330 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 MARCH1Q8TCQ1 289 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 SMIM4Q8WVI0 70 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 WDR89Q96FK6 387 aaPredicted RBP12.59□□□□□ -0.39
NEDD4-212ENST00000557845 ATP6V0BQ99437 205 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 NEURL2Q9BR09 285 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
NEDD4-212ENST00000557845 SLC2A8Q9NY64 477 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 C21orf62Q9NYP8 219 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 COPZ2Q9P299 210 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 RABL2AQ9UBK7 228 aaPredicted RBP12.59□□□□□ -0.39
NEDD4-212ENST00000557845 MLXQ9UH92 298 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 RABL2BQ9UNT1 228 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 SELENOKQ9Y6D0 94 aa12.59□□□□□ -0.39
NEDD4-212ENST00000557845 K7EIM0 57 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 CD7P09564 240 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 C8orf88P0DMB2 117 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
NEDD4-212ENST00000557845 PRCDQ00LT1 54 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 IL18Q14116 193 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 MEF2DQ14814 521 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 IZUMO4Q1ZYL8 232 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 SP6Q3SY56 376 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 MARC2Q969Z3 335 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 BSCL2Q96G97 398 aaPredicted RBP12.58□□□□□ -0.4
NEDD4-212ENST00000557845 MRPL27Q9P0M9 148 aaKnown RBP12.58□□□□□ -0.4
NEDD4-212ENST00000557845 UFC1Q9Y3C8 167 aa12.58□□□□□ -0.4
NEDD4-212ENST00000557845 F8W735 103 aaPredicted RBP12.57□□□□□ -0.4
NEDD4-212ENST00000557845 H3BMQ9 156 aa12.57□□□□□ -0.4
NEDD4-212ENST00000557845 NOL3O60936 208 aaKnown RBP12.57□□□□□ -0.4
NEDD4-212ENST00000557845 ATG12O94817 140 aa12.57□□□□□ -0.4
NEDD4-212ENST00000557845 CTSDP07339 412 aaPredicted RBP12.57□□□□□ -0.4
NEDD4-212ENST00000557845 ERHP84090 104 aaKnown RBP12.57□□□□□ -0.4
NEDD4-212ENST00000557845 HAGHQ16775 308 aa12.57□□□□□ -0.4
NEDD4-212ENST00000557845 FAAP20Q6NZ36 180 aa12.57□□□□□ -0.4
NEDD4-212ENST00000557845 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
NEDD4-212ENST00000557845 TMEM61Q8N0U2 210 aa12.57□□□□□ -0.4
NEDD4-212ENST00000557845 SLIRPQ9GZT3 109 aaKnown RBP12.57□□□□□ -0.4
NEDD4-212ENST00000557845 C6orf62Q9GZU0 229 aaPredicted RBP12.57□□□□□ -0.4
NEDD4-212ENST00000557845 PLEKHA3Q9HB20 300 aa12.57□□□□□ -0.4
NEDD4-212ENST00000557845 A0A0B4J293 547 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 DISC1C4P0D8 188 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 P0C879 139 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 AKAIN1P0CW23 69 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 UCP1P25874 307 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 TRIM16LQ309B1 348 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 Q56UQ5 140 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 LINC00322Q6ZN03 302 aaPredicted RBP12.56□□□□□ -0.4
NEDD4-212ENST00000557845 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 ZNF114Q8NC26 417 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 ISOC1Q96CN7 298 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
NEDD4-212ENST00000557845 CHRDL1Q9BU40 450 aa12.56□□□□□ -0.4
NEDD4-212ENST00000557845 KMT2CQ8NEZ4 4911 aaKnown RBP12.56□□□□□ -0.4
NEDD4-212ENST00000557845 OR11H12B2RN74 326 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 C3orf84H3BNL1 204 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 I3L2K1 104 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 NDUFA4O00483 81 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 B3GALNT1O75752 331 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 CTSGP08311 255 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 TNFSF8P32971 234 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 ADMP35318 185 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 AKR1C2P52895 323 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 DEFB125Q8N687 156 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 TMEM190Q8WZ59 177 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 GAR1Q9NY12 217 aaKnown RBP12.55□□□□□ -0.4
NEDD4-212ENST00000557845 RSL24D1Q9UHA3 163 aaKnown RBP12.55□□□□□ -0.4
NEDD4-212ENST00000557845 GPR132Q9UNW8 380 aa12.55□□□□□ -0.4
NEDD4-212ENST00000557845 C14orf166Q9Y224 244 aaKnown RBP12.55□□□□□ -0.4
NEDD4-212ENST00000557845 TRAV25A0A0B4J276 109 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 FABP12A6NFH5 140 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 ST8SIA3O43173 380 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 GSTZ1O43708 216 aaPredicted RBP12.54□□□□□ -0.4
NEDD4-212ENST00000557845 SCAF4O95104 1147 aaKnown RBP12.54□□□□□ -0.4
NEDD4-212ENST00000557845 MFAP4P55083 255 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 SURF2Q15527 256 aaPredicted RBP12.54□□□□□ -0.4
NEDD4-212ENST00000557845 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 MCFD2Q8NI22 146 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 TXN2Q99757 166 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 NXF2Q9GZY0 626 aaKnown RBP12.54□□□□□ -0.4
NEDD4-212ENST00000557845 C5orf66Q9H5L9 145 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms