RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NDUFS6O75380 124 aaKnown RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 CA11O75493 328 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 DEDDO75618 318 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 OR2A4O95047 310 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 IFNA10P01566 189 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 IGKV1-16P04430 117 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 CD2P06729 351 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 OR4E1P0C645 316 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 FUT3P21217 361 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 BDKRB2P30411 391 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 SNRPGP62308 76 aaKnown RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 RAB11AP62491 216 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 SSBP2P81877 361 aaPredicted RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 EWSR1Q01844 656 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 CD300CQ08708 224 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 SLAQ13239 276 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 FXYD3Q14802 87 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 RAB11BQ15907 218 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 RPEL1Q2QD12 228 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 MOGAT2Q3SYC2 334 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 LY6G6FQ5SQ64 297 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 MEDAGQ5VYS4 303 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 DMKNQ6E0U4 476 aaPredicted RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 XAF1Q6GPH4 301 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 FAM71F2Q6NXP2 309 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 ZNF343Q6P1L6 599 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 RNASEKQ6P5S7 137 aaKnown RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 GLIPR1L1Q6UWM5 242 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 OR13C5Q8NGS8 318 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 OR2K2Q8NGT1 345 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 OR6F1Q8NGZ6 308 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 MRPL30Q8TCC3 161 aaKnown RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 GALMQ96C23 342 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 CENPNQ96H22 339 aaPredicted RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 YPEL2Q96QA6 119 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 OVOL2Q9BRP0 275 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 PARP12Q9H0J9 701 aaKnown RBP4.39□□□□□ -1.71
VPS33B-207ENST00000557470 BANF2Q9H503 90 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 WASHC3Q9Y3C0 194 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 TRAV8-7A0A075B6U6 113 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 RNF222A6NCQ9 220 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 EI24O14681 340 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 RAB29O14966 203 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 PDCD6O75340 191 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 ALPLP05186 524 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 CRYGBP07316 175 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 MGMTP16455 207 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 IGFBP3P17936 291 aaPredicted RBP4.38□□□□□ -1.71
VPS33B-207ENST00000557470 RPL35P42766 123 aaKnown RBP4.38□□□□□ -1.71
VPS33B-207ENST00000557470 GPR176Q14439 515 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 HMGN3Q15651 99 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 GUCA2BQ16661 112 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 KCNIP4Q6PIL6 250 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 CEMP1Q6PRD7 247 aaPredicted RBP4.38□□□□□ -1.71
VPS33B-207ENST00000557470 JAGN1Q8N5M9 183 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 PACRGLQ8N7B6 248 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 DTD1Q8TEA8 209 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 GATAD1Q8WUU5 269 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 IL1F10Q8WWZ1 152 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 GHSRQ92847 366 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 MRPL53Q96EL3 112 aaKnown RBP4.38□□□□□ -1.71
VPS33B-207ENST00000557470 ABHD14BQ96IU4 210 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 OR14A2Q96R54 314 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 RNF5Q99942 180 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 DCUN1D5Q9BTE7 237 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 SELENOIQ9C0D9 397 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 Q9H8V8 135 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 AMBNQ9NP70 447 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 AKIP1Q9NQ31 210 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 MCUBQ9NWR8 336 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 PIPOXQ9P0Z9 390 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 MLXQ9UH92 298 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 MGAT4AQ9UM21 535 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 WDR83OSQ9Y284 106 aa4.38□□□□□ -1.71
VPS33B-207ENST00000557470 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 MARCH11A6NNE9 402 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 FAM90A26D6RGX4 464 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 H0YIZ8 118 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 J3QRK9 145 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 BMPR1BO00238 502 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 ITGB1BP1O14713 200 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 AIREO43918 545 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 PROP1O75360 226 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 SLC22A5O76082 557 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 IFNA7P01567 189 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 LINC00614P0C842 121 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 LIMS3P0CW19 117 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 LIMS4P0CW20 117 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 APELAP0DMC3 54 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 C4BPBP20851 252 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 AADACP22760 399 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 CEBPGP53567 150 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 LINC00205P59089 165 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 EXOSC2Q13868 293 aaKnown RBP4.37□□□□□ -1.71
VPS33B-207ENST00000557470 DEFB114Q30KQ6 69 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 CDNFQ49AH0 187 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 AWAT2Q6E213 333 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 RPL22L1Q6P5R6 122 aaKnown RBP4.37□□□□□ -1.71
VPS33B-207ENST00000557470 SMIM15Q7Z3B0 74 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms