RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 C8orf31Q8N9H6 132 aa11□□□□□ -0.65
SHMT2-222ENST00000555774 A0A1W2PN81 502 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 A0A1W2PRE2 83 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 ZNF705GA8MUZ8 300 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-222ENST00000555774 ESDP10768 282 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 GNG4P50150 75 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 ERHP84090 104 aaKnown RBP10.99□□□□□ -0.65
SHMT2-222ENST00000555774 PRSS8Q16651 343 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 COX19Q49B96 90 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 OR5AN1Q8NGI8 311 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
SHMT2-222ENST00000555774 HELTA6NFD8 242 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 C17orf100A8MU93 164 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 H0YJW9 148 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 ACTL6BO94805 426 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 OR4A8P0C604 315 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 HNF1AP20823 631 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 USF1P22415 310 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-222ENST00000555774 VSTM2AQ8TAG5 236 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 HARBI1Q96MB7 349 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 ZNF714Q96N38 554 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
SHMT2-222ENST00000555774 COMMD5Q9GZQ3 224 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 IGKV1OR2-108A0A075B7D4 117 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 C8orf88P0DMB2 117 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 RPL8P62917 257 aaKnown RBP10.98□□□□□ -0.65
SHMT2-222ENST00000555774 PAFAH1B2P68402 229 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 HLA-DRB5Q30154 266 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 CENPWQ5EE01 88 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 LINC00311Q8N616 119 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 ZNF596Q8TC21 504 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 ZNF503Q96F45 646 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 NDUFAF3Q9BU61 184 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 V9GYV3 84 aa10.98□□□□□ -0.65
SHMT2-222ENST00000555774 WDFY4Q6ZS81 3184 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 ERVFC1-1P60608 527 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 RAB4BP61018 213 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 C22orf34Q6ZV56 151 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 PDPNQ86YL7 162 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 MMD2Q8IY49 270 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 TMEM167AQ8TBQ9 72 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 MRPL18Q9H0U6 180 aaKnown RBP10.97□□□□□ -0.65
SHMT2-222ENST00000555774 HEATR1Q9H583 2144 aaKnown RBP10.97□□□□□ -0.65
SHMT2-222ENST00000555774 DSCAML1Q8TD84 2053 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 PRR14LQ5THK1 2151 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 C16orf97H3BN30 126 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 OR7C2O60412 319 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 MT-ND6P03923 174 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 CRYBB3P26998 211 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 TIGITQ495A1 244 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 OR1L6Q8NGR2 347 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 FLYWCH2Q96CP2 140 aaKnown RBP10.97□□□□□ -0.65
SHMT2-222ENST00000555774 SLC25A33Q9BSK2 321 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
SHMT2-222ENST00000555774 SLC17A3O00476 420 aa10.96□□□□□ -0.65
SHMT2-222ENST00000555774 ADIPOQQ15848 244 aa10.96□□□□□ -0.65
SHMT2-222ENST00000555774 WDR73Q6P4I2 378 aa10.96□□□□□ -0.65
SHMT2-222ENST00000555774 TMEM256Q8N2U0 113 aa10.96□□□□□ -0.65
SHMT2-222ENST00000555774 TMEM186Q96B77 213 aa10.96□□□□□ -0.65
SHMT2-222ENST00000555774 C2orf88Q9BSF0 95 aa10.96□□□□□ -0.65
SHMT2-222ENST00000555774 DCAF16Q9NXF7 216 aa10.96□□□□□ -0.65
SHMT2-222ENST00000555774 RAI1Q7Z5J4 1906 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-222ENST00000555774 DSCAMO60469 2012 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 PPIAL4EA0A075B759 164 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 PPIAL4DF5H284 164 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 ISLRO14498 428 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 PPIAL4FP0DN26 164 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 CBLN1P23435 193 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 TPPP2P59282 170 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 RANP62826 216 aaKnown RBP10.96□□□□□ -0.66
SHMT2-222ENST00000555774 CCL8P80075 99 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 Q0VG73 95 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 UNQ6494/PRO21346Q6UXR6 183 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 ASCL5Q7RTU5 278 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 MOB3BQ86TA1 216 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 OR4C13Q8NGP0 309 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 RND1Q92730 232 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 SNRNP40Q96DI7 357 aaKnown RBP10.96□□□□□ -0.66
SHMT2-222ENST00000555774 FAM122AQ96E09 287 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 MS4A10Q96PG2 267 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 PPIAL4AQ9Y536 164 aa10.96□□□□□ -0.66
SHMT2-222ENST00000555774 PSMB11A5LHX3 300 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 CRISP2P16562 243 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 SUB1P53999 127 aaKnown RBP eCLIP10.95□□□□□ -0.662e-7■■■□□ 15.5
SHMT2-222ENST00000555774 SSTP61278 116 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 TMEM200BQ69YZ2 307 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 ZNF600Q6ZNG1 722 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 OR9G1Q8NH87 305 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 NAGKQ9UJ70 344 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 VSTM5A8MXK1 200 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 GGTLC3B5MD39 225 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 TMEM178BH3BS89 294 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 PRRG2O14669 202 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 PPOXP50336 477 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 TAS2R60P59551 318 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 CX3CL1P78423 397 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms