RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 IGHV1-69-2A0A0G2JMI3 117 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 P0C879 139 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 TAS2R30P59541 319 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 TMEM200BQ69YZ2 307 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 RPUSD4Q96CM3 377 aaKnown RBP9.57□□□□□ -0.88
SHMT2-212ENST00000554467 ACY3Q96HD9 319 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 OR4C12Q96R67 309 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 TBX15Q96SF7 602 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 SLC25A22Q9H936 323 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-212ENST00000554467 NDUFB8O95169 186 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-212ENST00000554467 MSMO1Q15800 293 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 S1PR3Q99500 378 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 ADIRFQ15847 76 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF726P1Q15940 193 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 MS4A5Q9H3V2 200 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 AURKAIP1Q9NWT8 199 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-212ENST00000554467 HSPB7Q9UBY9 170 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 hADV38S2A0JD32 116 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 BAXQ07812 192 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 ETFRF1Q6IPR1 90 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 HIPK2Q9H2X6 1198 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 DIAPH2-AS1Q14236 149 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 C11orf42Q8N5U0 333 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 MIEN1Q9BRT3 115 aa9.56□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF525Q8N782 197 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 C22orf15Q8WYQ4 148 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 LHX4Q969G2 390 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 PRORYQ9H606 182 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 SLC39A9Q9NUM3 307 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 B9A039 149 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 NDUFB3O43676 98 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 HBE1P02100 147 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 IGKV1-16P04430 117 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 OR10J1P30954 320 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 CENPVQ7Z7K6 275 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF439Q8NDP4 499 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 HINT2Q9BX68 163 aa9.55□□□□□ -0.88
SHMT2-212ENST00000554467 RPUSD1Q9UJJ7 312 aaKnown RBP9.55□□□□□ -0.88
SHMT2-212ENST00000554467 RAB29O14966 203 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 RAB7AP51149 207 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 HBG1P69891 147 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 HBG2P69892 147 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 SLC38A11Q08AI6 406 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF714Q96N38 554 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 CTDSP1Q9GZU7 261 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 TMEM140Q9NV12 185 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 MAP1LC3B2A6NCE7 125 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 PPP5D1E7EU14 171 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 BCL2P10415 239 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 Q6ZVH6 145 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 OR4A16Q8NH70 328 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 MAP1LC3BQ9GZQ8 125 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 LINC00312Q9Y6C7 94 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 GALR1P47211 349 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF672Q499Z4 452 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-212ENST00000554467 LRRC10Q5BKY1 277 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 NAV3Q8IVL0 2385 aa9.54□□□□□ -0.88
SHMT2-212ENST00000554467 CSMD2Q7Z408 3487 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 A0A1W2PPQ1 181 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF705FA8MVS1 300 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF705DP0CH99 300 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF705BP0CI00 300 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-212ENST00000554467 LOXP28300 417 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-212ENST00000554467 CDKN1BP46527 198 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ERVK-16P61578 105 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 FBXL19-AS1Q494R0 122 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 TPTE2P1Q5T6R2 138 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 MRPL52Q86TS9 123 aaKnown RBP9.53□□□□□ -0.88
SHMT2-212ENST00000554467 C20orf144Q9BQM9 153 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 PIGBOS1A0A0B4J2F0 54 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 GNLYP22749 145 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 CDKN1AP38936 164 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 Q6ZWC4 215 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 GATAD1Q8WUU5 269 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 DDB2Q92466 427 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 SMIM7Q9BQ49 75 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 GAL3ST2Q9H3Q3 398 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ABCA1O95477 2261 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ZNF462Q96JM2 2506 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ITGB1BP1O14713 200 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 CT45A6P0DMU7 189 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 CT45A5P0DMU8 189 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 CT45A7P0DMV0 189 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 MMDQ15546 238 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 ABHD12Q8N2K0 398 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 STPG4Q8N801 248 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 OR1L6Q8NGR2 347 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 MRPL20Q9BYC9 149 aaKnown RBP9.53□□□□□ -0.88
SHMT2-212ENST00000554467 PAM16Q9Y3D7 125 aa9.53□□□□□ -0.88
SHMT2-212ENST00000554467 LRRK2Q5S007 2527 aa9.52□□□□□ -0.88
SHMT2-212ENST00000554467 FAM208BQ5VWN6 2430 aa9.52□□□□□ -0.88
SHMT2-212ENST00000554467 CNN1P51911 297 aaKnown RBP9.52□□□□□ -0.89
SHMT2-212ENST00000554467 FAM3BP58499 235 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-212ENST00000554467 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms