RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 C11orf1Q9H5F2 150 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 OR5AC2Q9NZP5 309 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 SH2D7A6NKC9 451 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 HMSDA8MTL9 139 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 G3V3Q6 166 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 SMLR1H3BR10 107 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 EGR2P11161 476 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 NPY1RP25929 384 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 PAX9P55771 341 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 SPANXN5Q5MJ07 72 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 UNQ5815/PRO19632Q6UWF5 114 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 STX12Q86Y82 276 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 TTC9CQ8N5M4 171 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 LFNGQ8NES3 379 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 OR2T6Q8NHC8 308 aa12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 FAM103A1Q9BTL3 118 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-203ENST00000547063 TRAV41A0A0B4J266 112 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 TMEM50AO95807 157 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 CRYGCP07315 174 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 DEFA4P12838 97 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 AREGP15514 252 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 CD300CQ08708 224 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 ECSCRQ19T08 205 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 BSXQ3C1V8 233 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 OR1P1Q8NH06 330 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 ZNF702PQ9H963 129 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 ZC4H2Q9NQZ6 224 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 TNFSF18Q9UNG2 199 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 FBXO7Q9Y3I1 522 aa12.48□□□□□ -0.41
TRAFD1-203ENST00000547063 H3BP45 60 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 CORTO00230 105 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 OR8U8P0C7N1 319 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 HIST1H1BP16401 226 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 CTRB1P17538 263 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 RPL12P30050 165 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 BAXQ07812 192 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 CTRB2Q6GPI1 263 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 TMEM252Q8N6L7 170 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 FAM110DQ8TAY7 271 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 PAIP2BQ9ULR5 123 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 F11RQ9Y624 299 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-203ENST00000547063 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 LINC01548A6NM66 108 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 ARPC5O15511 151 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 FBXO24O75426 580 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 IFNA4P05014 189 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 HNRNPCP07910 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 APELAP0DMC3 54 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 RNASE2P10153 161 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 SULT1A1P50225 295 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 HBG1P69891 147 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 HBG2P69892 147 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 SLC35B1P78383 322 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 TMEM14EPQ6UXP3 125 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 ACOT7LQ6ZUV0 252 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 STPG2Q8N412 459 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 OR11H4Q8NGC9 324 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 RNASEH2CQ8TDP1 164 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 P2RX4Q99571 388 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 MFFQ9GZY8 342 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 THYN1Q9P016 225 aa12.46□□□□□ -0.41
TRAFD1-203ENST00000547063 A0A0D9SG52 128 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 C15orf62A8K5M9 175 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 H3BUA1 57 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 REG1AP05451 166 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 OR2F1Q13607 317 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 ZNF345Q14585 488 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 Q6ZS46 218 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 OR10P1Q8NGE3 313 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 PINX1Q96BK5 328 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 OR4C12Q96R67 309 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 WNT10AQ9GZT5 417 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 C16orf95Q9H693 158 aa12.45□□□□□ -0.42
TRAFD1-203ENST00000547063 TMEM89A2RUT3 159 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 G3V318 75 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 NDUFA7O95182 113 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 BRI3O95415 125 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 HKR1P10072 659 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 C4BPBP20851 252 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 S100A11P31949 105 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 EWSR1Q01844 656 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 EXOSC2Q13868 293 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 C19orf54Q5BKX5 351 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 ETFRF1Q6IPR1 90 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 ETV3LQ6ZN32 361 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 Q6ZSV7 163 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 OR5T1Q8NG75 326 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
TRAFD1-203ENST00000547063 RPS10-NUDT3A0A1W2PQS6 291 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 IGSF23A1L1A6 192 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 KLK9Q2XQG4 91 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 PVRIGQ6DKI7 326 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 OR8G2PQ6IF36 304 aa12.43□□□□□ -0.42
TRAFD1-203ENST00000547063 SLC25A24Q6NUK1 477 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms