RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 OR4A16Q8NH70 328 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 RNASE11Q8TAA1 199 aaKnown RBP11.37□□□□□ -0.59
USB1-203ENST00000539737 S100ZQ8WXG8 99 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
USB1-203ENST00000539737 C7orf50Q9BRJ6 194 aaKnown RBP11.37□□□□□ -0.59
USB1-203ENST00000539737 TMEM222Q9H0R3 208 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 AKIP1Q9NQ31 210 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 OR51B2Q9Y5P1 312 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 A0A1B0GW64 132 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 ANKRD34BA5PLL1 514 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 IZUMO1RA6ND01 250 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 E7EUB6 86 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 CRYGCP07315 174 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 TRAPPC2P0DI81 140 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 TRAPPC2BP0DI82 140 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 ANXA3P12429 323 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 IL7P13232 177 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 MYOD1P15172 320 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 AREGP15514 252 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 PSMB6P28072 239 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 RBMS2Q15434 407 aaKnown RBP11.36□□□□□ -0.59
USB1-203ENST00000539737 SP6Q3SY56 376 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 NECAP1Q8NC96 275 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 LSM10Q969L4 123 aaKnown RBP11.36□□□□□ -0.59
USB1-203ENST00000539737 RRNAD1Q96FB5 475 aaKnown RBP11.36□□□□□ -0.59
USB1-203ENST00000539737 GALNT14Q96FL9 552 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 CCDC32Q9BV29 185 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 KCNIP3Q9Y2W7 256 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 NSG2Q9Y328 171 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 SELENOKQ9Y6D0 94 aa11.36□□□□□ -0.59
USB1-203ENST00000539737 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 PIGBOS1A0A0B4J2F0 54 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 IGLC7A0M8Q6 106 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 CGB1A6NKQ9 187 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 CYB5BO43169 146 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 RBMXL2O75526 392 aaKnown RBP11.35□□□□□ -0.59
USB1-203ENST00000539737 CDS2O95674 445 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 IGLV1-51P01701 117 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 HIST1H1BP16401 226 aaKnown RBP11.35□□□□□ -0.59
USB1-203ENST00000539737 CTRB1P17538 263 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 SRPXP78539 464 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 RHOGP84095 191 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 RPEL1Q2QD12 228 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 CTRB2Q6GPI1 263 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 TMED4Q7Z7H5 227 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 FAM219AQ8IW50 185 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 RBPMSQ93062 196 aaKnown RBP11.35□□□□□ -0.59
USB1-203ENST00000539737 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 TMEM56Q96MV1 263 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 PEF1Q9UBV8 284 aaKnown RBP11.35□□□□□ -0.59
USB1-203ENST00000539737 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
USB1-203ENST00000539737 TEX50A0A1B0GTY4 177 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 P0C879 139 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 DEFA4P12838 97 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 AKR1C4P17516 323 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 GLYATL2Q8WU03 294 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 IL22RA2Q969J5 263 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 HINT2Q9BX68 163 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 KMT2AQ03164 3969 aa11.34□□□□□ -0.59
USB1-203ENST00000539737 OR2J3O76001 311 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 PRH1P02810 166 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 REG1AP05451 166 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 MECP2P51608 486 aaKnown RBP11.33□□□□□ -0.6
USB1-203ENST00000539737 PRCDQ00LT1 54 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 ATP5G2Q06055 141 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 EXOSC2Q13868 293 aaKnown RBP11.33□□□□□ -0.6
USB1-203ENST00000539737 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 TMEM128Q5BJH2 165 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 TMEM268Q5VZI3 342 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 IL34Q6ZMJ4 242 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 WDR12Q9GZL7 423 aaKnown RBP11.33□□□□□ -0.6
USB1-203ENST00000539737 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
USB1-203ENST00000539737 LINC00854A0A1B0GVQ3 168 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 DBX1A6NMT0 343 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 JTBO76095 146 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 NDUFB6O95139 128 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 OR13C7P0DN81 318 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 CCR6P51684 374 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 SYNJ2BPP57105 145 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 UBE2MP61081 183 aaKnown RBP11.32□□□□□ -0.6
USB1-203ENST00000539737 HSPE1P61604 102 aaKnown RBP11.32□□□□□ -0.6
USB1-203ENST00000539737 WT1-ASQ06250 92 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 TMEM187Q14656 261 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 C15orf32Q32M92 178 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 SELENOHQ8IZQ5 122 aaKnown RBP11.32□□□□□ -0.6
USB1-203ENST00000539737 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 OR9G4Q8NGQ1 327 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms