RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 OR13A1Q8NGR1 328 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SPATA3Q8NHX4 192 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ASB13Q8WXK3 278 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ST6GALNAC6Q969X2 333 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SEH1LQ96EE3 360 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 COQ2Q96H96 371 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 RAX2Q96IS3 184 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ST6GALNAC5Q9BVH7 336 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TRAV30A0A087WSZ9 112 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 TGIF2-C20orf24A0A0A6YYL0 155 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 C5orf63A6NC05 138 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 G3V3Q6 166 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 M0R1X1 148 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 PPP1R2P9O14990 202 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 AGPAT2O15120 278 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 OR7C2O60412 319 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 DFFBO76075 338 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 LY6HO94772 140 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF205O95201 554 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 HLA-DQB1P01920 261 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 CTSDP07339 412 aaPredicted RBP2.9□□□□□ -1.94
PTPN22-211ENST00000538253 OR13C7P0DN81 318 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 EBI3Q14213 229 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 FAM201AQ5SY85 155 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 AADACL3Q5VUY0 350 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 ACOT7LQ6ZUV0 252 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 SIGLECL1Q8N7X8 197 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 C3orf56Q8N813 242 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 OR4F17Q8NGA8 305 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 LYPD6BQ8NI32 183 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 PLPPR1Q8TBJ4 325 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 C1orf147Q96MC9 270 aaPredicted RBP2.9□□□□□ -1.94
PTPN22-211ENST00000538253 CIB3Q96Q77 187 aaPredicted RBP2.9□□□□□ -1.94
PTPN22-211ENST00000538253 OR4F4Q96R69 305 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 SLC25A33Q9BSK2 321 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 PLEKHA2Q9HB19 425 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 ANAPC10Q9UM13 185 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 SLC45A2Q9UMX9 530 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 CSDC2Q9Y534 153 aaKnown RBP2.9□□□□□ -1.94
PTPN22-211ENST00000538253 REV3LO60673 3130 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 CREBBPQ92793 2442 aa2.9□□□□□ -1.94
PTPN22-211ENST00000538253 IGHV3-64DA0A0J9YX35 117 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 FAM240BA0A1B0GVZ2 78 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 SOCS1O15524 211 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 GPR137BO60478 399 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 PSPNO60542 156 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 S1PR2O95136 353 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 CMC4P56277 68 aaPredicted RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 CYCSP99999 105 aaKnown RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 BAXQ07812 192 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 UNC119Q13432 240 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM41BQ5BJD5 291 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 TCTEX1D4Q5JR98 221 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 SIGLEC15Q6ZMC9 328 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 RBPMS2Q6ZRY4 209 aaKnown RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF833PQ6ZTB9 187 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 OR8I2Q8N0Y5 310 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 LGI3Q8N145 548 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 MTURNQ8N3F0 131 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 OR1P1Q8NH06 330 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 ABHD5Q8WTS1 349 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 MOB3AQ96BX8 217 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 P2RX4Q99571 388 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 QTRT1Q9BXR0 403 aaKnown RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 FGF23Q9GZV9 251 aaPredicted RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 PPDPFQ9H3Y8 114 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 SLC2A8Q9NY64 477 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 USP9YO00507 2555 aaPredicted RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 PRUNE2Q8WUY3 3088 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 A0A0B4J2A0 478 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 INAFM1C9JVW0 142 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 G3V4G9 280 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 C15orf65H3BRN8 121 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 HSPB6O14558 160 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 NBR2O15453 112 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 VENTXO95231 258 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 IGLV1-47P01700 117 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 AMY2AP04746 511 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 ZFP36P26651 326 aaKnown RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 FCGR2CP31995 323 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 ERHP84090 104 aaKnown RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 C2orf68Q2NKX9 166 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 C1orf194Q5T5A4 169 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 GGNBP1Q5YKI7 109 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 RNASEKQ6P5S7 137 aaKnown RBP2.9□□□□□ -1.95
PTPN22-211ENST00000538253 C19orf35Q6ZS72 473 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 OR2T35Q8NGX2 323 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 DCUN1D4Q92564 292 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 SEC11CQ9BY50 192 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 COMMD5Q9GZQ3 224 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 SHPKQ9UHJ6 478 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 ALPK2Q86TB3 2170 aa2.9□□□□□ -1.95
PTPN22-211ENST00000538253 PLCE1Q9P212 2302 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TRAV39A0A0B4J263 110 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 IGHV1-3A0A0C4DH29 117 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM235A6NFC5 223 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 FOXI3A8MTJ6 420 aaPredicted RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 PPYP01298 95 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 HLA-DRB1P01911 266 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms