RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CRXO43186 299 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 ZNF324O75467 553 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 CA1P00915 261 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 MT-ND6P03923 174 aa2□□□□□ -2.09
SKA3-207ENST00000536239 RHOCP08134 193 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CD55P08174 381 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR9G9P0C7N8 305 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CT45A6P0DMU7 189 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CT45A5P0DMU8 189 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CT45A7P0DMV0 189 aa2□□□□□ -2.09
SKA3-207ENST00000536239 IFITM1P13164 125 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PMCHP20382 165 aa2□□□□□ -2.09
SKA3-207ENST00000536239 VDAC1P21796 283 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PRTN3P24158 256 aa2□□□□□ -2.09
SKA3-207ENST00000536239 RPS12P25398 132 aaKnown RBP2□□□□□ -2.09
SKA3-207ENST00000536239 IL3RAP26951 378 aa2□□□□□ -2.09
SKA3-207ENST00000536239 SRIP30626 198 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CXCL12P48061 93 aa2□□□□□ -2.09
SKA3-207ENST00000536239 RPL34P49207 117 aaKnown RBP2□□□□□ -2.09
SKA3-207ENST00000536239 PGFP49763 221 aa2□□□□□ -2.09
SKA3-207ENST00000536239 DLX6P56179 175 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CLDN6P56747 220 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ZNF121P58317 390 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 RHOAP61586 193 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PPP1CBP62140 327 aa2□□□□□ -2.09
SKA3-207ENST00000536239 RPL23P62829 140 aaKnown RBP2□□□□□ -2.09
SKA3-207ENST00000536239 CCL20P78556 96 aa2□□□□□ -2.09
SKA3-207ENST00000536239 TGFBR3Q03167 851 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ZNF117Q03924 483 aa2□□□□□ -2.09
SKA3-207ENST00000536239 MEF2CQ06413 473 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 CATR1Q13166 79 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PMVKQ15126 192 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ZNF77Q15935 545 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CDKN3Q16667 212 aa2□□□□□ -2.09
SKA3-207ENST00000536239 TIGITQ495A1 244 aa2□□□□□ -2.09
SKA3-207ENST00000536239 Q499Y3 187 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CT45A1Q5HYN5 189 aa2□□□□□ -2.09
SKA3-207ENST00000536239 TTC32Q5I0X7 151 aa2□□□□□ -2.09
SKA3-207ENST00000536239 GLYATL3Q5SZD4 288 aa2□□□□□ -2.09
SKA3-207ENST00000536239 FAM219BQ5XKK7 198 aa2□□□□□ -2.09
SKA3-207ENST00000536239 FRG2Q64ET8 278 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ACSM2BQ68CK6 577 aa2□□□□□ -2.09
SKA3-207ENST00000536239 Q6AWC8 147 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ADAMTSL5Q6ZMM2 481 aa2□□□□□ -2.09
SKA3-207ENST00000536239 Q6ZUT4 128 aa2□□□□□ -2.09
SKA3-207ENST00000536239 TMEM25Q86YD3 366 aa2□□□□□ -2.09
SKA3-207ENST00000536239 BPIFA4PQ86YQ2 179 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PRR22Q8IZ63 422 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CLECL1Q8IZS7 167 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OSR2Q8N2R0 312 aa2□□□□□ -2.09
SKA3-207ENST00000536239 LRRC25Q8N386 305 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 CLDN19Q8N6F1 224 aa2□□□□□ -2.09
SKA3-207ENST00000536239 TMEM99Q8N816 258 aa2□□□□□ -2.09
SKA3-207ENST00000536239 BCORP1Q8N888 145 aa2□□□□□ -2.09
SKA3-207ENST00000536239 MORN4Q8NDC4 146 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR2M3Q8NG83 312 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR51A4Q8NGJ6 313 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR5D14Q8NGL3 314 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR4A16Q8NH70 328 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR10G6Q8NH81 332 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR1L3Q8NH93 324 aa2□□□□□ -2.09
SKA3-207ENST00000536239 OR1L1Q8NH94 360 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ZNRF2Q8NHG8 242 aa2□□□□□ -2.09
SKA3-207ENST00000536239 KIR2DL5BQ8NHK3 375 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CT45A3Q8NHU0 189 aa2□□□□□ -2.09
SKA3-207ENST00000536239 C8orf46Q8TAG6 207 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ZPLD1Q8TCW7 415 aa2□□□□□ -2.09
SKA3-207ENST00000536239 RNF128Q8TEB7 428 aa2□□□□□ -2.09
SKA3-207ENST00000536239 RTN4IP1Q8WWV3 396 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 MBD3L1Q8WWY6 194 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ST8SIA1Q92185 356 aa2□□□□□ -2.09
SKA3-207ENST00000536239 NAT6Q93015 286 aa2□□□□□ -2.09
SKA3-207ENST00000536239 LHX4Q969G2 390 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CYYR1Q96J86 154 aa2□□□□□ -2.09
SKA3-207ENST00000536239 KCNS1Q96KK3 526 aa2□□□□□ -2.09
SKA3-207ENST00000536239 SGK494Q96LW2 274 aa2□□□□□ -2.09
SKA3-207ENST00000536239 SMIM7Q9BQ49 75 aa2□□□□□ -2.09
SKA3-207ENST00000536239 EBPLQ9BY08 206 aa2□□□□□ -2.09
SKA3-207ENST00000536239 GNB1LQ9BYB4 327 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ATG10Q9H0Y0 220 aa2□□□□□ -2.09
SKA3-207ENST00000536239 S1PR5Q9H228 398 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PLEKHF2Q9H8W4 249 aa2□□□□□ -2.09
SKA3-207ENST00000536239 HES4Q9HCC6 221 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ZNF71Q9NQZ8 489 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 PRTFDC1Q9NRG1 225 aa2□□□□□ -2.09
SKA3-207ENST00000536239 WRAP73Q9P2S5 460 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 CLCF1Q9UBD9 225 aa2□□□□□ -2.09
SKA3-207ENST00000536239 ABT1Q9ULW3 272 aaKnown RBP2□□□□□ -2.09
SKA3-207ENST00000536239 KLHDC2Q9Y2U9 406 aa2□□□□□ -2.09
SKA3-207ENST00000536239 TMED7Q9Y3B3 224 aa2□□□□□ -2.09
SKA3-207ENST00000536239 PTRH2Q9Y3E5 179 aaKnown RBP2□□□□□ -2.09
SKA3-207ENST00000536239 OARD1Q9Y530 152 aa2□□□□□ -2.09
SKA3-207ENST00000536239 LINC00312Q9Y6C7 94 aa2□□□□□ -2.09
SKA3-207ENST00000536239 NUP210Q8TEM1 1887 aaPredicted RBP2□□□□□ -2.09
SKA3-207ENST00000536239 PLXNA4Q9HCM2 1894 aa2□□□□□ -2.09
SKA3-207ENST00000536239 NUP98P52948 1817 aa2□□□□□ -2.09
SKA3-207ENST00000536239 DOCK8Q8NF50 2099 aa2□□□□□ -2.09
SKA3-207ENST00000536239 CASP8AP2Q9UKL3 1982 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 GREB1Q4ZG55 1949 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 MGAMO43451 1857 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms