RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 XPNPEP1Q9NQW7 623 aa0.48□□□□□ -2.33
PCM1-217ENST00000522998 NKIRAS1Q9NYS0 192 aa0.48□□□□□ -2.33
PCM1-217ENST00000522998 CEP192Q8TEP8 1941 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 TRBV20OR9-2A0A075B6H5 130 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 A0A0J9YY10 115 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 A0A1B0GX78 115 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 GGT3PA6NGU5 568 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 PMP2P02689 132 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 TPM3P06753 285 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 RPS4Y1P22090 263 aaKnown RBP0.47□□□□□ -2.33
PCM1-217ENST00000522998 MAGOHP61326 146 aaKnown RBP0.47□□□□□ -2.33
PCM1-217ENST00000522998 TPM4P67936 248 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 PRB3Q04118 309 aaPredicted RBP0.47□□□□□ -2.33
PCM1-217ENST00000522998 DMTNQ08495 405 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 STX5Q13190 355 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 PMAIP1Q13794 54 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 KISS1Q15726 138 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 COQ5Q5HYK3 327 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 ALKAL1Q6UXT8 129 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 C12orf29Q8N999 325 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 RASSF5Q8WWW0 418 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 PTH2Q96A98 100 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 ODF3Q96PU9 254 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 DERL1Q9BUN8 251 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 REG4Q9BYZ8 158 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 FAM96AQ9H5X1 160 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 EIF4G1Q04637 1599 aaKnown RBP0.47□□□□□ -2.33
PCM1-217ENST00000522998 DOCK3Q8IZD9 2030 aa0.47□□□□□ -2.33
PCM1-217ENST00000522998 EML5Q05BV3 1969 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 EVC2Q86UK5 1308 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 IGKV2D-26A0A0A0MRZ7 120 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 SHBGP04278 402 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 UBBP0CG47 229 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 AP2S1P53680 142 aaPredicted RBP0.46□□□□□ -2.34
PCM1-217ENST00000522998 RUNX1Q01196 453 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 IFITM2Q01629 132 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 GRK1Q15835 563 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 HIST3H3Q16695 136 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 Q6ZS49 121 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 ZNF826PQ6ZT77 177 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 DEFB128Q7Z7B8 93 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 LRRC25Q8N386 305 aaPredicted RBP0.46□□□□□ -2.34
PCM1-217ENST00000522998 TMEM86BQ8N661 226 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 ZNF565Q8N9K5 539 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 OR5B17Q8NGF7 314 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 PFN4Q8NHR9 129 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 SLC35B4Q969S0 331 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 WDR61Q9GZS3 305 aaKnown RBP0.46□□□□□ -2.34
PCM1-217ENST00000522998 TRABDQ9H4I3 376 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 LSM5Q9Y4Y9 91 aaKnown RBP0.46□□□□□ -2.34
PCM1-217ENST00000522998 SNURFQ9Y675 71 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 DENND4CQ5VZ89 1909 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 PLXND1Q9Y4D7 1925 aa0.46□□□□□ -2.34
PCM1-217ENST00000522998 ZNF106Q9H2Y7 1883 aaKnown RBP0.46□□□□□ -2.34
PCM1-217ENST00000522998 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
PCM1-217ENST00000522998 ZFC3H1O60293 1989 aaKnown RBP0.45□□□□□ -2.34
PCM1-217ENST00000522998 TMEM212A6NML5 194 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 EEF1E1-BLOC1S5C9J1V9 151 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 TGOLN2O43493 480 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 IGKV1-5P01602 117 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 HTR1AP08908 422 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 TCL1AP56279 114 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 COTL1Q14019 142 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 CDKL4Q5MAI5 379 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 AADACL3Q5VUY0 350 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 RPL22L1Q6P5R6 122 aaKnown RBP0.45□□□□□ -2.34
PCM1-217ENST00000522998 LCN15Q6UWW0 184 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 FAM19A2Q8N3H0 131 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 OR13C4Q8NGS5 318 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 OR2T4Q8NH00 348 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 MRPL30Q8TCC3 161 aaKnown RBP0.45□□□□□ -2.34
PCM1-217ENST00000522998 AQP3Q92482 292 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 TMEM106AQ96A25 262 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 SERPINI1Q99574 410 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 SCN10AQ9Y5Y9 1956 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 LAMB4A4D0S4 1761 aa0.45□□□□□ -2.34
PCM1-217ENST00000522998 TTC21AQ8NDW8 1320 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 LOC110117498A0A087WWA1 95 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 FUOMA2VDF0 154 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 GOLGA6L19H0YKK7 550 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 GEMIN2O14893 280 aaKnown RBP0.44□□□□□ -2.34
PCM1-217ENST00000522998 CTSDP07339 412 aaPredicted RBP0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H2BOP23527 126 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H2BBP33778 126 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 EIF2B2P49770 351 aaKnown RBP0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H2BDP58876 126 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H2BCP62807 126 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 UBE2IP63279 158 aaKnown RBP0.44□□□□□ -2.34
PCM1-217ENST00000522998 OR2F1Q13607 317 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST2H2BEQ16778 126 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 DEFB115Q30KQ5 88 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 SPANXN3Q5MJ09 141 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.44□□□□□ -2.34
PCM1-217ENST00000522998 TEX36Q5VZQ5 186 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 LPCAT4Q643R3 524 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 Q6ZQT0 140 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 AAED1Q7RTV5 226 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 OR4D11Q8NGI4 311 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 OR4C6Q8NH72 309 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H2BHQ93079 126 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms